Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Vars2Q3U2A8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Vars2Q3U2A8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Vars2Q3U2A8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC29.89■■■□□ 2.38
Vars2Q3U2A8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Vars2Q3U2A8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Vars2Q3U2A8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Vars2Q3U2A8 Gm13238-201ENSMUST00000117655 780 ntBASIC29.88■■■□□ 2.37
Vars2Q3U2A8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Vars2Q3U2A8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Vars2Q3U2A8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Vars2Q3U2A8 Gm14117-201ENSMUST00000122417 843 ntBASIC29.87■■■□□ 2.37
Vars2Q3U2A8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC29.87■■■□□ 2.37
Vars2Q3U2A8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC29.86■■■□□ 2.37
Vars2Q3U2A8 Gm43566-201ENSMUST00000196851 808 ntBASIC29.85■■■□□ 2.37
Vars2Q3U2A8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Vars2Q3U2A8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Vars2Q3U2A8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Vars2Q3U2A8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC29.84■■■□□ 2.37
Vars2Q3U2A8 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.84■■■□□ 2.37
Vars2Q3U2A8 Terc-201ENSMUST00000082862 423 ntBASIC29.84■■■□□ 2.37
Vars2Q3U2A8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
Vars2Q3U2A8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Vars2Q3U2A8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.83■■■□□ 2.37
Vars2Q3U2A8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
Vars2Q3U2A8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Vars2Q3U2A8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Vars2Q3U2A8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29.83■■■□□ 2.37
Vars2Q3U2A8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.82■■■□□ 2.36
Vars2Q3U2A8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC29.82■■■□□ 2.36
Vars2Q3U2A8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Vars2Q3U2A8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.81■■■□□ 2.36
Vars2Q3U2A8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Vars2Q3U2A8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Vars2Q3U2A8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Vars2Q3U2A8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.79■■■□□ 2.36
Vars2Q3U2A8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Vars2Q3U2A8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
Vars2Q3U2A8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Vars2Q3U2A8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Vars2Q3U2A8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
Vars2Q3U2A8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Vars2Q3U2A8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC29.76■■■□□ 2.35
Vars2Q3U2A8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29.76■■■□□ 2.35
Vars2Q3U2A8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Vars2Q3U2A8 Nsd1-203ENSMUST00000224156 1149 ntBASIC29.76■■■□□ 2.35
Vars2Q3U2A8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Vars2Q3U2A8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Vars2Q3U2A8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Vars2Q3U2A8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Vars2Q3U2A8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC29.75■■■□□ 2.35
Vars2Q3U2A8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Vars2Q3U2A8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Vars2Q3U2A8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC29.71■■■□□ 2.35
Vars2Q3U2A8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Vars2Q3U2A8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Vars2Q3U2A8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
Vars2Q3U2A8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Vars2Q3U2A8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Vars2Q3U2A8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Vars2Q3U2A8 Gm42501-201ENSMUST00000200220 1026 ntBASIC29.69■■■□□ 2.34
Vars2Q3U2A8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Vars2Q3U2A8 Gm9959-201ENSMUST00000068277 390 ntBASIC29.68■■■□□ 2.34
Vars2Q3U2A8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Vars2Q3U2A8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC29.67■■■□□ 2.34
Vars2Q3U2A8 Gm45444-201ENSMUST00000211394 898 ntBASIC29.67■■■□□ 2.34
Vars2Q3U2A8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.67■■■□□ 2.34
Vars2Q3U2A8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Vars2Q3U2A8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Vars2Q3U2A8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Vars2Q3U2A8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vars2Q3U2A8 Gm43592-201ENSMUST00000196922 1165 ntBASIC29.64■■■□□ 2.34
Vars2Q3U2A8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vars2Q3U2A8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Vars2Q3U2A8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vars2Q3U2A8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Vars2Q3U2A8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.63■■■□□ 2.33
Vars2Q3U2A8 Gm44428-201ENSMUST00000204474 874 ntBASIC29.63■■■□□ 2.33
Vars2Q3U2A8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Vars2Q3U2A8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
Vars2Q3U2A8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC29.63■■■□□ 2.33
Vars2Q3U2A8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC29.62■■■□□ 2.33
Vars2Q3U2A8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Vars2Q3U2A8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Vars2Q3U2A8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC29.6■■■□□ 2.33
Vars2Q3U2A8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Vars2Q3U2A8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Vars2Q3U2A8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Vars2Q3U2A8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC29.58■■■□□ 2.33
Vars2Q3U2A8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Vars2Q3U2A8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Vars2Q3U2A8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Vars2Q3U2A8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
Vars2Q3U2A8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Vars2Q3U2A8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC29.57■■■□□ 2.32
Vars2Q3U2A8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC29.57■■■□□ 2.32
Vars2Q3U2A8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Vars2Q3U2A8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Vars2Q3U2A8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
Vars2Q3U2A8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms