Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q3U1D9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q3U1D9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Q3U1D9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q3U1D9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Q3U1D9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q3U1D9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q3U1D9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q3U1D9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q3U1D9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q3U1D9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.01■□□□□ 0.79
Q3U1D9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.01■□□□□ 0.79
Q3U1D9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.01■□□□□ 0.79
Q3U1D9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.01■□□□□ 0.79
Q3U1D9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.01■□□□□ 0.79
Q3U1D9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q3U1D9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
Q3U1D9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20■□□□□ 0.79
Q3U1D9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q3U1D9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20■□□□□ 0.79
Q3U1D9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
Q3U1D9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20■□□□□ 0.79
Q3U1D9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q3U1D9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q3U1D9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Q3U1D9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.98■□□□□ 0.79
Q3U1D9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Q3U1D9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q3U1D9 Terc-201ENSMUST00000082862 423 ntBASIC19.98■□□□□ 0.79
Q3U1D9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Q3U1D9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q3U1D9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.97■□□□□ 0.79
Q3U1D9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q3U1D9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.97■□□□□ 0.79
Q3U1D9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Q3U1D9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q3U1D9 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.96■□□□□ 0.79
Q3U1D9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Q3U1D9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q3U1D9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q3U1D9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q3U1D9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q3U1D9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q3U1D9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q3U1D9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q3U1D9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q3U1D9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q3U1D9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q3U1D9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q3U1D9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q3U1D9 Gm27502-201ENSMUST00000183495 199 ntBASIC19.93■□□□□ 0.78
Q3U1D9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Q3U1D9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q3U1D9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q3U1D9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q3U1D9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q3U1D9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Q3U1D9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Q3U1D9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Q3U1D9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.91■□□□□ 0.78
Q3U1D9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.91■□□□□ 0.78
Q3U1D9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3U1D9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q3U1D9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3U1D9 Gm7332-201ENSMUST00000118351 454 ntBASIC19.9■□□□□ 0.78
Q3U1D9 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.9■□□□□ 0.78
Q3U1D9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.9■□□□□ 0.78
Q3U1D9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3U1D9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.89■□□□□ 0.77
Q3U1D9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3U1D9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3U1D9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q3U1D9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.88■□□□□ 0.77
Q3U1D9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3U1D9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3U1D9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Q3U1D9 Gm14523-201ENSMUST00000117260 558 ntBASIC19.87■□□□□ 0.77
Q3U1D9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.87■□□□□ 0.77
Q3U1D9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q3U1D9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3U1D9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3U1D9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.86■□□□□ 0.77
Q3U1D9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3U1D9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Q3U1D9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Q3U1D9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3U1D9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.85■□□□□ 0.77
Q3U1D9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3U1D9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3U1D9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3U1D9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3U1D9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Q3U1D9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3U1D9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Q3U1D9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms