Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h3bP84228 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Hist1h3bP84228 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h3bP84228 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.1■□□□□ 0.81
Hist1h3bP84228 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h3bP84228 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.1■□□□□ 0.81
Hist1h3bP84228 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h3bP84228 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h3bP84228 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hist1h3bP84228 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h3bP84228 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.09■□□□□ 0.81
Hist1h3bP84228 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h3bP84228 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hist1h3bP84228 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h3bP84228 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h3bP84228 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.08■□□□□ 0.8
Hist1h3bP84228 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Hist1h3bP84228 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hist1h3bP84228 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
Hist1h3bP84228 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h3bP84228 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h3bP84228 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.06■□□□□ 0.8
Hist1h3bP84228 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.06■□□□□ 0.8
Hist1h3bP84228 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h3bP84228 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h3bP84228 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h3bP84228 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h3bP84228 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h3bP84228 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h3bP84228 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hist1h3bP84228 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h3bP84228 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3bP84228 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3bP84228 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3bP84228 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3bP84228 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3bP84228 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h3bP84228 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h3bP84228 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h3bP84228 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hist1h3bP84228 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h3bP84228 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3bP84228 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3bP84228 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3bP84228 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3bP84228 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h3bP84228 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
Hist1h3bP84228 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h3bP84228 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20■□□□□ 0.79
Hist1h3bP84228 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3bP84228 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3bP84228 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3bP84228 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3bP84228 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3bP84228 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3bP84228 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hist1h3bP84228 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3bP84228 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h3bP84228 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h3bP84228 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h3bP84228 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3bP84228 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3bP84228 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3bP84228 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3bP84228 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3bP84228 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h3bP84228 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h3bP84228 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.96■□□□□ 0.79
Hist1h3bP84228 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Hist1h3bP84228 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3bP84228 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3bP84228 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3bP84228 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hist1h3bP84228 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Gm7432-201ENSMUST00000210343 879 ntBASIC19.94■□□□□ 0.78
Hist1h3bP84228 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3bP84228 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hist1h3bP84228 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h3bP84228 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hist1h3bP84228 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.92■□□□□ 0.78
Hist1h3bP84228 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hist1h3bP84228 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h3bP84228 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.91■□□□□ 0.78
Hist1h3bP84228 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hist1h3bP84228 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h3bP84228 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h3bP84228 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.89■□□□□ 0.77
Hist1h3bP84228 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms