Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.44■□□□□ 0.86
SgcbP82349 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SgcbP82349 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.43■□□□□ 0.86
SgcbP82349 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.43■□□□□ 0.86
SgcbP82349 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SgcbP82349 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SgcbP82349 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcbP82349 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcbP82349 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcbP82349 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SgcbP82349 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SgcbP82349 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SgcbP82349 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SgcbP82349 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.4■□□□□ 0.86
SgcbP82349 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SgcbP82349 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SgcbP82349 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SgcbP82349 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SgcbP82349 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SgcbP82349 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcbP82349 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcbP82349 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SgcbP82349 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcbP82349 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SgcbP82349 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SgcbP82349 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcbP82349 Gm45364-201ENSMUST00000210883 159 ntBASIC20.36■□□□□ 0.85
SgcbP82349 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SgcbP82349 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.35■□□□□ 0.85
SgcbP82349 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SgcbP82349 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SgcbP82349 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
SgcbP82349 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SgcbP82349 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.34■□□□□ 0.85
SgcbP82349 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.34■□□□□ 0.85
SgcbP82349 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.34■□□□□ 0.85
SgcbP82349 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SgcbP82349 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.34■□□□□ 0.85
SgcbP82349 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SgcbP82349 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SgcbP82349 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcbP82349 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
SgcbP82349 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.32■□□□□ 0.84
SgcbP82349 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcbP82349 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SgcbP82349 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SgcbP82349 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcbP82349 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcbP82349 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SgcbP82349 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
SgcbP82349 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SgcbP82349 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcbP82349 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcbP82349 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SgcbP82349 Scarna2-201ENSMUST00000157560 414 ntBASIC20.29■□□□□ 0.84
SgcbP82349 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SgcbP82349 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SgcbP82349 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SgcbP82349 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SgcbP82349 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.28■□□□□ 0.84
SgcbP82349 Gm9812-201ENSMUST00000061934 968 ntBASIC20.28■□□□□ 0.84
SgcbP82349 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.27■□□□□ 0.84
SgcbP82349 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcbP82349 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SgcbP82349 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcbP82349 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.26■□□□□ 0.83
SgcbP82349 Gm9806-201ENSMUST00000051080 552 ntBASIC20.26■□□□□ 0.83
SgcbP82349 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcbP82349 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SgcbP82349 Gm11687-201ENSMUST00000118911 886 ntBASIC20.25■□□□□ 0.83
SgcbP82349 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SgcbP82349 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.25■□□□□ 0.83
SgcbP82349 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SgcbP82349 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SgcbP82349 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SgcbP82349 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SgcbP82349 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SgcbP82349 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.24■□□□□ 0.83
SgcbP82349 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SgcbP82349 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SgcbP82349 Gm16437-201ENSMUST00000025669 507 ntBASIC20.23■□□□□ 0.83
SgcbP82349 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcbP82349 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcbP82349 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SgcbP82349 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SgcbP82349 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SgcbP82349 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SgcbP82349 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SgcbP82349 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms