Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm15546-201ENSMUST00000122095 826 ntBASIC20.28■□□□□ 0.84
TgfaP48030 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.28■□□□□ 0.84
TgfaP48030 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TgfaP48030 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.28■□□□□ 0.84
TgfaP48030 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TgfaP48030 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TgfaP48030 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TgfaP48030 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TgfaP48030 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.27■□□□□ 0.84
TgfaP48030 Terc-201ENSMUST00000082862 423 ntBASIC20.27■□□□□ 0.84
TgfaP48030 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TgfaP48030 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TgfaP48030 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TgfaP48030 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TgfaP48030 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TgfaP48030 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
TgfaP48030 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TgfaP48030 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TgfaP48030 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TgfaP48030 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TgfaP48030 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TgfaP48030 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TgfaP48030 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TgfaP48030 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TgfaP48030 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TgfaP48030 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TgfaP48030 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TgfaP48030 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TgfaP48030 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TgfaP48030 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TgfaP48030 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TgfaP48030 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TgfaP48030 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.19■□□□□ 0.82
TgfaP48030 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TgfaP48030 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TgfaP48030 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TgfaP48030 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TgfaP48030 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TgfaP48030 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TgfaP48030 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TgfaP48030 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TgfaP48030 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TgfaP48030 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TgfaP48030 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.16■□□□□ 0.82
TgfaP48030 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TgfaP48030 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TgfaP48030 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TgfaP48030 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.15■□□□□ 0.82
TgfaP48030 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TgfaP48030 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TgfaP48030 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TgfaP48030 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TgfaP48030 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TgfaP48030 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TgfaP48030 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TgfaP48030 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.12■□□□□ 0.81
TgfaP48030 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TgfaP48030 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TgfaP48030 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TgfaP48030 Gm44428-201ENSMUST00000204474 874 ntBASIC20.1■□□□□ 0.81
TgfaP48030 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.1■□□□□ 0.81
TgfaP48030 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TgfaP48030 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.1■□□□□ 0.81
TgfaP48030 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TgfaP48030 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TgfaP48030 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.08■□□□□ 0.81
TgfaP48030 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TgfaP48030 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TgfaP48030 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.08■□□□□ 0.81
TgfaP48030 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TgfaP48030 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.08■□□□□ 0.81
TgfaP48030 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TgfaP48030 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TgfaP48030 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TgfaP48030 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TgfaP48030 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TgfaP48030 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TgfaP48030 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TgfaP48030 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TgfaP48030 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.05■□□□□ 0.8
TgfaP48030 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TgfaP48030 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.05■□□□□ 0.8
TgfaP48030 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.05■□□□□ 0.8
TgfaP48030 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.05■□□□□ 0.8
TgfaP48030 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.05■□□□□ 0.8
TgfaP48030 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
TgfaP48030 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TgfaP48030 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TgfaP48030 Gm15820-201ENSMUST00000201566 728 ntBASIC20.04■□□□□ 0.8
TgfaP48030 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TgfaP48030 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TgfaP48030 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TgfaP48030 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.03■□□□□ 0.8
TgfaP48030 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.03■□□□□ 0.8
TgfaP48030 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms