Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.73■■■■□ 3.15
Kdm5cP41230 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Kdm5cP41230 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.72■■■■□ 3.15
Kdm5cP41230 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Kdm5cP41230 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Kdm5cP41230 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
Kdm5cP41230 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Kdm5cP41230 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Kdm5cP41230 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Kdm5cP41230 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
Kdm5cP41230 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
Kdm5cP41230 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Kdm5cP41230 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Kdm5cP41230 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Kdm5cP41230 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
Kdm5cP41230 Terc-201ENSMUST00000082862 423 ntBASIC34.65■■■■□ 3.14
Kdm5cP41230 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.64■■■■□ 3.14
Kdm5cP41230 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Kdm5cP41230 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC34.64■■■■□ 3.14
Kdm5cP41230 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Kdm5cP41230 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC34.63■■■■□ 3.13
Kdm5cP41230 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC34.63■■■■□ 3.13
Kdm5cP41230 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC34.63■■■■□ 3.13
Kdm5cP41230 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Kdm5cP41230 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC34.63■■■■□ 3.13
Kdm5cP41230 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
Kdm5cP41230 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Kdm5cP41230 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Kdm5cP41230 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC34.59■■■■□ 3.13
Kdm5cP41230 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Kdm5cP41230 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
Kdm5cP41230 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
Kdm5cP41230 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Kdm5cP41230 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Kdm5cP41230 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Kdm5cP41230 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Kdm5cP41230 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC34.57■■■■□ 3.13
Kdm5cP41230 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC34.57■■■■□ 3.12
Kdm5cP41230 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
Kdm5cP41230 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Kdm5cP41230 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Kdm5cP41230 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC34.55■■■■□ 3.12
Kdm5cP41230 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC34.54■■■■□ 3.12
Kdm5cP41230 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Kdm5cP41230 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC34.54■■■■□ 3.12
Kdm5cP41230 Gm43566-201ENSMUST00000196851 808 ntBASIC34.53■■■■□ 3.12
Kdm5cP41230 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Kdm5cP41230 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Kdm5cP41230 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Kdm5cP41230 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
Kdm5cP41230 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Kdm5cP41230 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC34.52■■■■□ 3.12
Kdm5cP41230 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Kdm5cP41230 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC34.52■■■■□ 3.12
Kdm5cP41230 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Kdm5cP41230 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Kdm5cP41230 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC34.51■■■■□ 3.12
Kdm5cP41230 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
Kdm5cP41230 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC34.51■■■■□ 3.11
Kdm5cP41230 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Kdm5cP41230 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Kdm5cP41230 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC34.49■■■■□ 3.11
Kdm5cP41230 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC34.49■■■■□ 3.11
Kdm5cP41230 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Kdm5cP41230 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Kdm5cP41230 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Kdm5cP41230 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Kdm5cP41230 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
Kdm5cP41230 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Kdm5cP41230 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
Kdm5cP41230 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Kdm5cP41230 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Kdm5cP41230 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC34.45■■■■□ 3.11
Kdm5cP41230 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Kdm5cP41230 Gm13238-201ENSMUST00000117655 780 ntBASIC34.45■■■■□ 3.11
Kdm5cP41230 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
Kdm5cP41230 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Kdm5cP41230 AC153504.1-201ENSMUST00000218379 2290 ntBASIC34.45■■■■□ 3.11
Kdm5cP41230 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC34.45■■■■□ 3.1
Kdm5cP41230 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Kdm5cP41230 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
Kdm5cP41230 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC34.43■■■■□ 3.1
Kdm5cP41230 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Kdm5cP41230 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
Kdm5cP41230 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
Kdm5cP41230 AC093043.1-201ENSMUST00000226700 898 ntBASIC34.42■■■■□ 3.1
Kdm5cP41230 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC34.42■■■■□ 3.1
Kdm5cP41230 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Kdm5cP41230 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
Kdm5cP41230 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
Kdm5cP41230 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Kdm5cP41230 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm5cP41230 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm5cP41230 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm5cP41230 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm5cP41230 Gm45444-201ENSMUST00000211394 898 ntBASIC34.35■■■■□ 3.09
Kdm5cP41230 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
Kdm5cP41230 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm5cP41230 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Kdm5cP41230 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC34.34■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms