Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Cdh4P39038 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdh4P39038 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh4P39038 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh4P39038 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdh4P39038 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.89■■□□□ 1.09
Cdh4P39038 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdh4P39038 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.89■■□□□ 1.09
Cdh4P39038 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh4P39038 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh4P39038 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.88■■□□□ 1.09
Cdh4P39038 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.88■■□□□ 1.09
Cdh4P39038 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdh4P39038 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdh4P39038 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdh4P39038 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.87■■□□□ 1.09
Cdh4P39038 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Cdh4P39038 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdh4P39038 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Cdh4P39038 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.86■■□□□ 1.09
Cdh4P39038 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdh4P39038 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.84■■□□□ 1.09
Cdh4P39038 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdh4P39038 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdh4P39038 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Cdh4P39038 Gm45364-201ENSMUST00000210883 159 ntBASIC21.83■■□□□ 1.09
Cdh4P39038 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdh4P39038 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh4P39038 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh4P39038 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh4P39038 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Cdh4P39038 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.82■■□□□ 1.08
Cdh4P39038 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh4P39038 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh4P39038 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh4P39038 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.81■■□□□ 1.08
Cdh4P39038 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cdh4P39038 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdh4P39038 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh4P39038 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.81■■□□□ 1.08
Cdh4P39038 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh4P39038 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh4P39038 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh4P39038 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh4P39038 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.8■■□□□ 1.08
Cdh4P39038 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh4P39038 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh4P39038 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh4P39038 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh4P39038 Gm9812-201ENSMUST00000061934 968 ntBASIC21.78■■□□□ 1.08
Cdh4P39038 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh4P39038 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh4P39038 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh4P39038 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cdh4P39038 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cdh4P39038 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdh4P39038 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.76■■□□□ 1.07
Cdh4P39038 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Cdh4P39038 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh4P39038 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh4P39038 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh4P39038 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh4P39038 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cdh4P39038 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdh4P39038 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.74■■□□□ 1.07
Cdh4P39038 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh4P39038 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh4P39038 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Cdh4P39038 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
Cdh4P39038 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh4P39038 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh4P39038 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh4P39038 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh4P39038 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Cdh4P39038 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh4P39038 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh4P39038 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Cdh4P39038 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh4P39038 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh4P39038 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.71■■□□□ 1.07
Cdh4P39038 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh4P39038 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cdh4P39038 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh4P39038 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.69■■□□□ 1.06
Cdh4P39038 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh4P39038 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh4P39038 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cdh4P39038 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cdh4P39038 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms