Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab5cP35278 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab5cP35278 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab5cP35278 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rab5cP35278 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab5cP35278 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab5cP35278 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab5cP35278 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab5cP35278 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab5cP35278 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab5cP35278 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rab5cP35278 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab5cP35278 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Rab5cP35278 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rab5cP35278 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab5cP35278 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rab5cP35278 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab5cP35278 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab5cP35278 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.73■□□□□ 0.59
Rab5cP35278 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab5cP35278 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rab5cP35278 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rab5cP35278 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab5cP35278 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab5cP35278 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab5cP35278 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.72■□□□□ 0.59
Rab5cP35278 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab5cP35278 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab5cP35278 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.71■□□□□ 0.59
Rab5cP35278 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab5cP35278 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab5cP35278 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rab5cP35278 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab5cP35278 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab5cP35278 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab5cP35278 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab5cP35278 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rab5cP35278 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Rab5cP35278 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab5cP35278 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab5cP35278 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Rab5cP35278 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab5cP35278 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab5cP35278 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab5cP35278 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab5cP35278 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab5cP35278 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rab5cP35278 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rab5cP35278 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.66■□□□□ 0.58
Rab5cP35278 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.66■□□□□ 0.58
Rab5cP35278 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab5cP35278 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab5cP35278 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab5cP35278 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab5cP35278 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab5cP35278 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab5cP35278 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab5cP35278 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab5cP35278 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab5cP35278 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab5cP35278 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab5cP35278 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab5cP35278 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab5cP35278 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab5cP35278 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab5cP35278 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rab5cP35278 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.63■□□□□ 0.57
Rab5cP35278 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab5cP35278 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab5cP35278 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab5cP35278 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab5cP35278 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab5cP35278 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab5cP35278 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab5cP35278 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab5cP35278 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rab5cP35278 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rab5cP35278 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rab5cP35278 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab5cP35278 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rab5cP35278 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rab5cP35278 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab5cP35278 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab5cP35278 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rab5cP35278 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab5cP35278 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.59■□□□□ 0.57
Rab5cP35278 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab5cP35278 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms