Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf1aP25118 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf1aP25118 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.06■□□□□ 0.64
Tnfrsf1aP25118 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1aP25118 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Gm37136-201ENSMUST00000194368 194 ntBASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Gm8503-201ENSMUST00000118131 455 ntBASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1aP25118 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.95■□□□□ 0.62
Tnfrsf1aP25118 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 202.6 ms