Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fn1P11276 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Fn1P11276 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.51■□□□□ 0.55
Fn1P11276 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fn1P11276 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Fn1P11276 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fn1P11276 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.51■□□□□ 0.55
Fn1P11276 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Fn1P11276 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Fn1P11276 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fn1P11276 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.49■□□□□ 0.55
Fn1P11276 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fn1P11276 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fn1P11276 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.48■□□□□ 0.55
Fn1P11276 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Fn1P11276 Gm9812-201ENSMUST00000061934 968 ntBASIC18.48■□□□□ 0.55
Fn1P11276 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fn1P11276 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fn1P11276 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Fn1P11276 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.48■□□□□ 0.55
Fn1P11276 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fn1P11276 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Fn1P11276 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fn1P11276 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fn1P11276 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Fn1P11276 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fn1P11276 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fn1P11276 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fn1P11276 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.44■□□□□ 0.54
Fn1P11276 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Fn1P11276 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fn1P11276 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fn1P11276 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fn1P11276 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.43■□□□□ 0.54
Fn1P11276 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Fn1P11276 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.43■□□□□ 0.54
Fn1P11276 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.42■□□□□ 0.54
Fn1P11276 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.41■□□□□ 0.54
Fn1P11276 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Fn1P11276 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fn1P11276 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.4■□□□□ 0.54
Fn1P11276 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Fn1P11276 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Fn1P11276 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
Fn1P11276 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fn1P11276 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.38■□□□□ 0.53
Fn1P11276 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fn1P11276 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fn1P11276 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fn1P11276 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fn1P11276 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fn1P11276 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fn1P11276 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.36■□□□□ 0.53
Fn1P11276 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fn1P11276 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fn1P11276 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Fn1P11276 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fn1P11276 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fn1P11276 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fn1P11276 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fn1P11276 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fn1P11276 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Fn1P11276 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
Fn1P11276 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.32■□□□□ 0.52
Fn1P11276 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fn1P11276 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Fn1P11276 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.32■□□□□ 0.52
Fn1P11276 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fn1P11276 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.31■□□□□ 0.52
Fn1P11276 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.31■□□□□ 0.52
Fn1P11276 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fn1P11276 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.31■□□□□ 0.52
Fn1P11276 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fn1P11276 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fn1P11276 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.31■□□□□ 0.52
Fn1P11276 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fn1P11276 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.31■□□□□ 0.52
Fn1P11276 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.3■□□□□ 0.52
Fn1P11276 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fn1P11276 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Fn1P11276 Gm21956-201ENSMUST00000179946 522 ntBASIC18.29■□□□□ 0.52
Fn1P11276 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fn1P11276 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.28■□□□□ 0.52
Fn1P11276 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms