Protein–RNA interactions for Protein: P07350

Ifna6, Interferon alpha-6, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna6P07350 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ifna6P07350 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifna6P07350 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ifna6P07350 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ifna6P07350 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifna6P07350 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ifna6P07350 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.8■□□□□ 0.6
Ifna6P07350 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifna6P07350 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifna6P07350 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ifna6P07350 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifna6P07350 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifna6P07350 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.78■□□□□ 0.6
Ifna6P07350 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.78■□□□□ 0.6
Ifna6P07350 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifna6P07350 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ifna6P07350 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifna6P07350 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.77■□□□□ 0.6
Ifna6P07350 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.77■□□□□ 0.6
Ifna6P07350 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ifna6P07350 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifna6P07350 Gm30023-201ENSMUST00000197970 889 ntBASIC18.76■□□□□ 0.59
Ifna6P07350 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ifna6P07350 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ifna6P07350 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna6P07350 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna6P07350 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna6P07350 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna6P07350 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ifna6P07350 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna6P07350 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna6P07350 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna6P07350 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ifna6P07350 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna6P07350 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.72■□□□□ 0.59
Ifna6P07350 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Ifna6P07350 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna6P07350 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ifna6P07350 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna6P07350 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna6P07350 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ifna6P07350 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna6P07350 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ifna6P07350 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ifna6P07350 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ifna6P07350 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna6P07350 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ifna6P07350 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna6P07350 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna6P07350 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna6P07350 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna6P07350 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ifna6P07350 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna6P07350 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.68■□□□□ 0.58
Ifna6P07350 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Ifna6P07350 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna6P07350 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna6P07350 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna6P07350 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna6P07350 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ifna6P07350 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna6P07350 Gm24970-201ENSMUST00000175582 82 ntBASIC18.67■□□□□ 0.58
Ifna6P07350 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ifna6P07350 Zfp131-205ENSMUST00000223812 663 ntBASIC18.67■□□□□ 0.58
Ifna6P07350 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna6P07350 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.66■□□□□ 0.58
Ifna6P07350 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ifna6P07350 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Ifna6P07350 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ifna6P07350 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.65■□□□□ 0.58
Ifna6P07350 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ifna6P07350 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ifna6P07350 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna6P07350 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna6P07350 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ifna6P07350 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna6P07350 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna6P07350 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna6P07350 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna6P07350 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna6P07350 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.63■□□□□ 0.57
Ifna6P07350 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna6P07350 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna6P07350 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ifna6P07350 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.62■□□□□ 0.57
Ifna6P07350 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ifna6P07350 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ifna6P07350 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms