Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
P04946 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
P04946 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04946 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04946 Cap2-205ENSMUST00000225824 1634 ntBASIC19.95■□□□□ 0.78
P04946 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04946 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04946 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04946 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04946 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
P04946 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.94■□□□□ 0.78
P04946 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.94■□□□□ 0.78
P04946 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
P04946 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P04946 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
P04946 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04946 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04946 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04946 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04946 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04946 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04946 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04946 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
P04946 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04946 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P04946 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.9■□□□□ 0.78
P04946 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
P04946 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04946 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P04946 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04946 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.89■□□□□ 0.77
P04946 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04946 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04946 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04946 Terc-201ENSMUST00000082862 423 ntBASIC19.89■□□□□ 0.77
P04946 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04946 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
P04946 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
P04946 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.88■□□□□ 0.77
P04946 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P04946 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04946 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04946 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04946 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.87■□□□□ 0.77
P04946 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.86■□□□□ 0.77
P04946 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04946 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04946 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04946 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.85■□□□□ 0.77
P04946 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04946 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.84■□□□□ 0.77
P04946 Gm12366-201ENSMUST00000121722 873 ntBASIC19.84■□□□□ 0.77
P04946 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.84■□□□□ 0.77
P04946 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04946 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.84■□□□□ 0.77
P04946 Gm5786-201ENSMUST00000085368 882 ntBASIC19.84■□□□□ 0.77
P04946 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
P04946 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
P04946 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.83■□□□□ 0.77
P04946 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
P04946 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.83■□□□□ 0.77
P04946 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
P04946 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04946 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04946 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04946 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04946 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.81■□□□□ 0.76
P04946 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04946 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P04946 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.8■□□□□ 0.76
P04946 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04946 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.79■□□□□ 0.76
P04946 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04946 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.79■□□□□ 0.76
P04946 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04946 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04946 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04946 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04946 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04946 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04946 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04946 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P04946 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.77■□□□□ 0.76
P04946 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04946 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
P04946 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.76■□□□□ 0.75
P04946 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
P04946 Gm27502-201ENSMUST00000183495 199 ntBASIC19.76■□□□□ 0.75
P04946 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04946 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04946 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P04946 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04946 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P04946 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms