Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm7332-201ENSMUST00000118351 454 ntBASIC24.66■■□□□ 1.54
Ttc3O88196 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ttc3O88196 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ttc3O88196 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.64■■□□□ 1.54
Ttc3O88196 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ttc3O88196 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.63■■□□□ 1.53
Ttc3O88196 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ttc3O88196 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ttc3O88196 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ttc3O88196 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ttc3O88196 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ttc3O88196 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ttc3O88196 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ttc3O88196 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ttc3O88196 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ttc3O88196 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc3O88196 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc3O88196 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc3O88196 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc3O88196 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.61■■□□□ 1.53
Ttc3O88196 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc3O88196 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.6■■□□□ 1.53
Ttc3O88196 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc3O88196 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc3O88196 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ttc3O88196 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ttc3O88196 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ttc3O88196 Terc-201ENSMUST00000082862 423 ntBASIC24.58■■□□□ 1.53
Ttc3O88196 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ttc3O88196 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.58■■□□□ 1.52
Ttc3O88196 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Ttc3O88196 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ttc3O88196 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.57■■□□□ 1.52
Ttc3O88196 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.57■■□□□ 1.52
Ttc3O88196 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Ttc3O88196 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ttc3O88196 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.56■■□□□ 1.52
Ttc3O88196 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ttc3O88196 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ttc3O88196 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.56■■□□□ 1.52
Ttc3O88196 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ttc3O88196 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ttc3O88196 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ttc3O88196 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
Ttc3O88196 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc3O88196 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ttc3O88196 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc3O88196 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.54■■□□□ 1.52
Ttc3O88196 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc3O88196 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.53■■□□□ 1.52
Ttc3O88196 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc3O88196 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc3O88196 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc3O88196 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.51■■□□□ 1.51
Ttc3O88196 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc3O88196 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.51■■□□□ 1.51
Ttc3O88196 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.51■■□□□ 1.51
Ttc3O88196 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc3O88196 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.51■■□□□ 1.51
Ttc3O88196 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc3O88196 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc3O88196 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc3O88196 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc3O88196 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc3O88196 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Ttc3O88196 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc3O88196 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc3O88196 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc3O88196 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ttc3O88196 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ttc3O88196 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.47■■□□□ 1.51
Ttc3O88196 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Ttc3O88196 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.46■■□□□ 1.51
Ttc3O88196 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ttc3O88196 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.46■■□□□ 1.51
Ttc3O88196 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.45■■□□□ 1.51
Ttc3O88196 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
Ttc3O88196 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ttc3O88196 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.45■■□□□ 1.5
Ttc3O88196 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc3O88196 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc3O88196 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc3O88196 Gm14523-201ENSMUST00000117260 558 ntBASIC24.44■■□□□ 1.5
Ttc3O88196 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc3O88196 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc3O88196 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc3O88196 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc3O88196 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc3O88196 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc3O88196 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc3O88196 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc3O88196 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc3O88196 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc3O88196 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms