Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.71■■□□□ 1.23
Tspan6O70401 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tspan6O70401 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tspan6O70401 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tspan6O70401 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
Tspan6O70401 Gm7332-201ENSMUST00000118351 454 ntBASIC22.7■■□□□ 1.22
Tspan6O70401 Gm27502-201ENSMUST00000183495 199 ntBASIC22.7■■□□□ 1.22
Tspan6O70401 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tspan6O70401 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.69■■□□□ 1.22
Tspan6O70401 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tspan6O70401 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.68■■□□□ 1.22
Tspan6O70401 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tspan6O70401 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tspan6O70401 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tspan6O70401 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tspan6O70401 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tspan6O70401 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tspan6O70401 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.66■■□□□ 1.22
Tspan6O70401 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tspan6O70401 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tspan6O70401 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.65■■□□□ 1.22
Tspan6O70401 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tspan6O70401 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tspan6O70401 Gm14523-201ENSMUST00000117260 558 ntBASIC22.64■■□□□ 1.21
Tspan6O70401 Terc-201ENSMUST00000082862 423 ntBASIC22.64■■□□□ 1.21
Tspan6O70401 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tspan6O70401 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Tspan6O70401 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Tspan6O70401 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tspan6O70401 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tspan6O70401 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tspan6O70401 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tspan6O70401 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tspan6O70401 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.61■■□□□ 1.21
Tspan6O70401 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.61■■□□□ 1.21
Tspan6O70401 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tspan6O70401 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.61■■□□□ 1.21
Tspan6O70401 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tspan6O70401 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.61■■□□□ 1.21
Tspan6O70401 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tspan6O70401 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.6■■□□□ 1.21
Tspan6O70401 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tspan6O70401 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tspan6O70401 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Tspan6O70401 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tspan6O70401 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tspan6O70401 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tspan6O70401 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.58■■□□□ 1.21
Tspan6O70401 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Tspan6O70401 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Tspan6O70401 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Tspan6O70401 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Tspan6O70401 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Tspan6O70401 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tspan6O70401 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Tspan6O70401 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tspan6O70401 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.54■■□□□ 1.2
Tspan6O70401 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Tspan6O70401 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
Tspan6O70401 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tspan6O70401 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tspan6O70401 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tspan6O70401 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Tspan6O70401 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.51■■□□□ 1.19
Tspan6O70401 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tspan6O70401 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tspan6O70401 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Tspan6O70401 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.5■■□□□ 1.19
Tspan6O70401 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.5■■□□□ 1.19
Tspan6O70401 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tspan6O70401 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.49■■□□□ 1.19
Tspan6O70401 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tspan6O70401 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Tspan6O70401 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tspan6O70401 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.48■■□□□ 1.19
Tspan6O70401 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tspan6O70401 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.47■■□□□ 1.19
Tspan6O70401 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tspan6O70401 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.47■■□□□ 1.19
Tspan6O70401 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.46■■□□□ 1.19
Tspan6O70401 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tspan6O70401 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Tspan6O70401 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tspan6O70401 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.45■■□□□ 1.18
Tspan6O70401 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tspan6O70401 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.45■■□□□ 1.18
Tspan6O70401 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.44■■□□□ 1.18
Tspan6O70401 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tspan6O70401 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tspan6O70401 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.43■■□□□ 1.18
Tspan6O70401 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.43■■□□□ 1.18
Tspan6O70401 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tspan6O70401 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tspan6O70401 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms