Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Alx3O70137 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.77■□□□□ 0.91
Alx3O70137 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alx3O70137 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Alx3O70137 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.76■□□□□ 0.91
Alx3O70137 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alx3O70137 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Alx3O70137 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alx3O70137 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alx3O70137 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx3O70137 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx3O70137 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Alx3O70137 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alx3O70137 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Alx3O70137 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alx3O70137 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx3O70137 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx3O70137 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Alx3O70137 Nkain2-201ENSMUST00000092602 558 ntBASIC20.72■□□□□ 0.91
Alx3O70137 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.71■□□□□ 0.91
Alx3O70137 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Alx3O70137 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Alx3O70137 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.71■□□□□ 0.91
Alx3O70137 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx3O70137 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx3O70137 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx3O70137 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Alx3O70137 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx3O70137 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Alx3O70137 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx3O70137 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx3O70137 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx3O70137 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx3O70137 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx3O70137 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx3O70137 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx3O70137 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.68■□□□□ 0.9
Alx3O70137 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx3O70137 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Alx3O70137 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx3O70137 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.67■□□□□ 0.9
Alx3O70137 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx3O70137 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Alx3O70137 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx3O70137 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.66■□□□□ 0.9
Alx3O70137 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Alx3O70137 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx3O70137 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx3O70137 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx3O70137 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alx3O70137 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Alx3O70137 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Alx3O70137 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.65■□□□□ 0.9
Alx3O70137 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Alx3O70137 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Alx3O70137 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Alx3O70137 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Alx3O70137 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Alx3O70137 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Alx3O70137 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Alx3O70137 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Alx3O70137 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Alx3O70137 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.61■□□□□ 0.89
Alx3O70137 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alx3O70137 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Alx3O70137 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Alx3O70137 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Alx3O70137 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.59■□□□□ 0.89
Alx3O70137 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Alx3O70137 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Alx3O70137 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Alx3O70137 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Alx3O70137 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Alx3O70137 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.59■□□□□ 0.89
Alx3O70137 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Alx3O70137 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.58■□□□□ 0.89
Alx3O70137 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.58■□□□□ 0.89
Alx3O70137 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Alx3O70137 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Alx3O70137 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx3O70137 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Alx3O70137 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
Alx3O70137 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx3O70137 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.56■□□□□ 0.88
Alx3O70137 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx3O70137 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.56■□□□□ 0.88
Alx3O70137 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Alx3O70137 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Alx3O70137 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Alx3O70137 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms