Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Col15a1O35206 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Col15a1O35206 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Col15a1O35206 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Col15a1O35206 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Col15a1O35206 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Col15a1O35206 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
Col15a1O35206 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Col15a1O35206 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.46■■■□□ 2.47
Col15a1O35206 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Col15a1O35206 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Col15a1O35206 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Col15a1O35206 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.44■■■□□ 2.46
Col15a1O35206 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.43■■■□□ 2.46
Col15a1O35206 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Col15a1O35206 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Col15a1O35206 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.42■■■□□ 2.46
Col15a1O35206 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Col15a1O35206 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Col15a1O35206 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Col15a1O35206 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Col15a1O35206 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.41■■■□□ 2.46
Col15a1O35206 Gm10420-201ENSMUST00000121713 882 ntBASIC30.41■■■□□ 2.46
Col15a1O35206 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Col15a1O35206 Terc-201ENSMUST00000082862 423 ntBASIC30.41■■■□□ 2.46
Col15a1O35206 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Col15a1O35206 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Col15a1O35206 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Col15a1O35206 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Col15a1O35206 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Col15a1O35206 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Col15a1O35206 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col15a1O35206 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col15a1O35206 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col15a1O35206 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col15a1O35206 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col15a1O35206 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Col15a1O35206 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col15a1O35206 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.35■■■□□ 2.45
Col15a1O35206 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.35■■■□□ 2.45
Col15a1O35206 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col15a1O35206 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Col15a1O35206 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Col15a1O35206 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.34■■■□□ 2.45
Col15a1O35206 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Col15a1O35206 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Col15a1O35206 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Col15a1O35206 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.32■■■□□ 2.44
Col15a1O35206 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.32■■■□□ 2.44
Col15a1O35206 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Col15a1O35206 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.31■■■□□ 2.44
Col15a1O35206 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.31■■■□□ 2.44
Col15a1O35206 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Col15a1O35206 Gm5812-201ENSMUST00000061073 957 ntBASIC30.29■■■□□ 2.44
Col15a1O35206 Gm5921-201ENSMUST00000075898 882 ntBASIC30.29■■■□□ 2.44
Col15a1O35206 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Col15a1O35206 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Col15a1O35206 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.28■■■□□ 2.44
Col15a1O35206 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Col15a1O35206 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.28■■■□□ 2.44
Col15a1O35206 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col15a1O35206 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Col15a1O35206 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
Col15a1O35206 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Col15a1O35206 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col15a1O35206 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col15a1O35206 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.24■■■□□ 2.43
Col15a1O35206 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col15a1O35206 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col15a1O35206 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col15a1O35206 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col15a1O35206 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Col15a1O35206 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col15a1O35206 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Col15a1O35206 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Col15a1O35206 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col15a1O35206 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Col15a1O35206 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Col15a1O35206 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Col15a1O35206 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Col15a1O35206 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Col15a1O35206 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30.18■■■□□ 2.42
Col15a1O35206 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.18■■■□□ 2.42
Col15a1O35206 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Col15a1O35206 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.16■■■□□ 2.42
Col15a1O35206 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
Col15a1O35206 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col15a1O35206 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Col15a1O35206 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Col15a1O35206 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Col15a1O35206 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Col15a1O35206 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Col15a1O35206 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.12■■■□□ 2.41
Col15a1O35206 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Col15a1O35206 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Col15a1O35206 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.11■■■□□ 2.41
Col15a1O35206 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30.1■■■□□ 2.41
Col15a1O35206 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30.1■■■□□ 2.41
Col15a1O35206 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Col15a1O35206 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms