Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1O08852 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1O08852 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1O08852 Gm45102-201ENSMUST00000207427 857 ntBASIC15.2■□□□□ 0.02
Pkd1O08852 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1O08852 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.19■□□□□ 0.02
Pkd1O08852 Gm15820-201ENSMUST00000201566 728 ntBASIC15.19■□□□□ 0.02
Pkd1O08852 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.19■□□□□ 0.02
Pkd1O08852 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1O08852 Gm14117-201ENSMUST00000122417 843 ntBASIC15.18■□□□□ 0.02
Pkd1O08852 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pkd1O08852 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1O08852 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1O08852 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1O08852 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1O08852 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pkd1O08852 Rps24-207ENSMUST00000224568 714 ntBASIC15.17■□□□□ 0.02
Pkd1O08852 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkd1O08852 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.17■□□□□ 0.02
Pkd1O08852 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1O08852 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkd1O08852 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.16■□□□□ 0.02
Pkd1O08852 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pkd1O08852 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.15■□□□□ 0.02
Pkd1O08852 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pkd1O08852 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.15■□□□□ 0.02
Pkd1O08852 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.14■□□□□ 0.02
Pkd1O08852 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pkd1O08852 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pkd1O08852 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pkd1O08852 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pkd1O08852 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.14■□□□□ 0.01
Pkd1O08852 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.14■□□□□ 0.01
Pkd1O08852 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pkd1O08852 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pkd1O08852 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.13■□□□□ 0.01
Pkd1O08852 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pkd1O08852 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.13■□□□□ 0.01
Pkd1O08852 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pkd1O08852 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pkd1O08852 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pkd1O08852 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pkd1O08852 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pkd1O08852 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pkd1O08852 Serp2-204ENSMUST00000228055 705 ntBASIC15.12■□□□□ 0.01
Pkd1O08852 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Pkd1O08852 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pkd1O08852 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pkd1O08852 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.12■□□□□ 0.01
Pkd1O08852 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.11■□□□□ 0.01
Pkd1O08852 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pkd1O08852 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.11■□□□□ 0.01
Pkd1O08852 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pkd1O08852 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.1■□□□□ 0.01
Pkd1O08852 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pkd1O08852 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pkd1O08852 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pkd1O08852 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.09■□□□□ 0.01
Pkd1O08852 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pkd1O08852 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Pkd1O08852 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pkd1O08852 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pkd1O08852 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pkd1O08852 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pkd1O08852 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Pkd1O08852 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pkd1O08852 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pkd1O08852 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pkd1O08852 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pkd1O08852 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pkd1O08852 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pkd1O08852 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pkd1O08852 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pkd1O08852 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pkd1O08852 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pkd1O08852 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.07■□□□□ 0
Pkd1O08852 Gm43566-201ENSMUST00000196851 808 ntBASIC15.06■□□□□ 0
Pkd1O08852 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pkd1O08852 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pkd1O08852 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pkd1O08852 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pkd1O08852 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pkd1O08852 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pkd1O08852 Gm45444-201ENSMUST00000211394 898 ntBASIC15.05■□□□□ -0
Pkd1O08852 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pkd1O08852 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.05■□□□□ -0
Pkd1O08852 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pkd1O08852 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pkd1O08852 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pkd1O08852 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms