Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3727J3QM54 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3727J3QM54 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm3727J3QM54 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3727J3QM54 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3727J3QM54 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3727J3QM54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Gm3727J3QM54 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gm3727J3QM54 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3727J3QM54 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3727J3QM54 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3727J3QM54 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3727J3QM54 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3727J3QM54 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.51■□□□□ 0.71
Gm3727J3QM54 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3727J3QM54 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3727J3QM54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gm3727J3QM54 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3727J3QM54 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3727J3QM54 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3727J3QM54 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3727J3QM54 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3727J3QM54 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gm3727J3QM54 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3727J3QM54 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3727J3QM54 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3727J3QM54 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gm3727J3QM54 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3727J3QM54 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3727J3QM54 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3727J3QM54 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3727J3QM54 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3727J3QM54 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Gm3727J3QM54 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3727J3QM54 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3727J3QM54 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.46■□□□□ 0.71
Gm3727J3QM54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3727J3QM54 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3727J3QM54 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3727J3QM54 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3727J3QM54 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Gm3727J3QM54 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3727J3QM54 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3727J3QM54 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3727J3QM54 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3727J3QM54 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3727J3QM54 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gm3727J3QM54 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3727J3QM54 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3727J3QM54 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gm3727J3QM54 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3727J3QM54 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3727J3QM54 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3727J3QM54 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm3727J3QM54 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3727J3QM54 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.41■□□□□ 0.7
Gm3727J3QM54 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3727J3QM54 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3727J3QM54 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm3727J3QM54 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3727J3QM54 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3727J3QM54 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3727J3QM54 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3727J3QM54 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.38■□□□□ 0.69
Gm3727J3QM54 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3727J3QM54 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3727J3QM54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.37■□□□□ 0.69
Gm3727J3QM54 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3727J3QM54 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.37■□□□□ 0.69
Gm3727J3QM54 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.37■□□□□ 0.69
Gm3727J3QM54 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3727J3QM54 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3727J3QM54 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm3727J3QM54 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3727J3QM54 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Gm3727J3QM54 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3727J3QM54 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm3727J3QM54 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3727J3QM54 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3727J3QM54 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3727J3QM54 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3727J3QM54 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms