Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm21818J3KMS6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Gm21818J3KMS6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Gm21818J3KMS6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21818J3KMS6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.5■□□□□ 0.71
Gm21818J3KMS6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.5■□□□□ 0.71
Gm21818J3KMS6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21818J3KMS6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21818J3KMS6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm21818J3KMS6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm21818J3KMS6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm21818J3KMS6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm21818J3KMS6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21818J3KMS6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm21818J3KMS6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm21818J3KMS6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm21818J3KMS6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm21818J3KMS6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm21818J3KMS6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm21818J3KMS6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm21818J3KMS6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm21818J3KMS6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm21818J3KMS6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Gm21818J3KMS6 Gm30023-201ENSMUST00000197970 889 ntBASIC19.43■□□□□ 0.7
Gm21818J3KMS6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm21818J3KMS6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm21818J3KMS6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21818J3KMS6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm21818J3KMS6 Particl-201ENSMUST00000205370 1560 ntBASIC19.41■□□□□ 0.7
Gm21818J3KMS6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm21818J3KMS6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gm21818J3KMS6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21818J3KMS6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gm21818J3KMS6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21818J3KMS6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21818J3KMS6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21818J3KMS6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21818J3KMS6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21818J3KMS6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21818J3KMS6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21818J3KMS6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm21818J3KMS6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm21818J3KMS6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.37■□□□□ 0.69
Gm21818J3KMS6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm21818J3KMS6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm21818J3KMS6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm21818J3KMS6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Gm21818J3KMS6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21818J3KMS6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21818J3KMS6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm21818J3KMS6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Gm21818J3KMS6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms