Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
IsxA1A546 Peli2-204ENSMUST00000226513 1320 ntBASIC21.36■■□□□ 1.01
IsxA1A546 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IsxA1A546 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IsxA1A546 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
IsxA1A546 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.36■■□□□ 1.01
IsxA1A546 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IsxA1A546 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IsxA1A546 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.35■■□□□ 1.01
IsxA1A546 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IsxA1A546 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IsxA1A546 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.35■■□□□ 1.01
IsxA1A546 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IsxA1A546 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IsxA1A546 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IsxA1A546 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IsxA1A546 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IsxA1A546 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
IsxA1A546 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IsxA1A546 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IsxA1A546 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
IsxA1A546 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.33■■□□□ 1
IsxA1A546 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.32■■□□□ 1
IsxA1A546 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.32■■□□□ 1
IsxA1A546 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IsxA1A546 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
IsxA1A546 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IsxA1A546 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
IsxA1A546 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
IsxA1A546 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.32■■□□□ 1
IsxA1A546 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IsxA1A546 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.31■■□□□ 1
IsxA1A546 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
IsxA1A546 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.3■■□□□ 1
IsxA1A546 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.3■■□□□ 1
IsxA1A546 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.3■■□□□ 1
IsxA1A546 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.3■■□□□ 1
IsxA1A546 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
IsxA1A546 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
IsxA1A546 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IsxA1A546 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
IsxA1A546 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.28■■□□□ 1
IsxA1A546 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.28■■□□□ 1
IsxA1A546 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.28■■□□□ 1
IsxA1A546 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.28■■□□□ 1
IsxA1A546 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
IsxA1A546 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
IsxA1A546 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IsxA1A546 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.26■□□□□ 0.99
IsxA1A546 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IsxA1A546 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
IsxA1A546 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.25■□□□□ 0.99
IsxA1A546 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IsxA1A546 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IsxA1A546 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
IsxA1A546 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IsxA1A546 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IsxA1A546 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.22■□□□□ 0.99
IsxA1A546 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
IsxA1A546 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IsxA1A546 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
IsxA1A546 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IsxA1A546 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IsxA1A546 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.21■□□□□ 0.99
IsxA1A546 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IsxA1A546 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
IsxA1A546 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IsxA1A546 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.19■□□□□ 0.98
IsxA1A546 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IsxA1A546 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IsxA1A546 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IsxA1A546 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
IsxA1A546 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IsxA1A546 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IsxA1A546 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IsxA1A546 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
IsxA1A546 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IsxA1A546 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IsxA1A546 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IsxA1A546 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
IsxA1A546 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IsxA1A546 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
IsxA1A546 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms