Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Gm10420-201ENSMUST00000121713 882 ntBASIC25.53■■□□□ 1.68
Slc6a21A0A1B0GSD2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Slc6a21A0A1B0GSD2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
Slc6a21A0A1B0GSD2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Slc6a21A0A1B0GSD2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Slc6a21A0A1B0GSD2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Slc6a21A0A1B0GSD2 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.52■■□□□ 1.68
Slc6a21A0A1B0GSD2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Slc6a21A0A1B0GSD2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Slc6a21A0A1B0GSD2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Slc6a21A0A1B0GSD2 Terc-201ENSMUST00000082862 423 ntBASIC25.51■■□□□ 1.67
Slc6a21A0A1B0GSD2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a21A0A1B0GSD2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Slc6a21A0A1B0GSD2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a21A0A1B0GSD2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a21A0A1B0GSD2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a21A0A1B0GSD2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Slc6a21A0A1B0GSD2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Slc6a21A0A1B0GSD2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.49■■□□□ 1.67
Slc6a21A0A1B0GSD2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Slc6a21A0A1B0GSD2 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.47■■□□□ 1.67
Slc6a21A0A1B0GSD2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Slc6a21A0A1B0GSD2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a21A0A1B0GSD2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Slc6a21A0A1B0GSD2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a21A0A1B0GSD2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a21A0A1B0GSD2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a21A0A1B0GSD2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Slc6a21A0A1B0GSD2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.43■■□□□ 1.66
Slc6a21A0A1B0GSD2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.43■■□□□ 1.66
Slc6a21A0A1B0GSD2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gm5921-201ENSMUST00000075898 882 ntBASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gm5812-201ENSMUST00000061073 957 ntBASIC25.41■■□□□ 1.66
Slc6a21A0A1B0GSD2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Slc6a21A0A1B0GSD2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Slc6a21A0A1B0GSD2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slc6a21A0A1B0GSD2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a21A0A1B0GSD2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a21A0A1B0GSD2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Slc6a21A0A1B0GSD2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a21A0A1B0GSD2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
Slc6a21A0A1B0GSD2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.66
Slc6a21A0A1B0GSD2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Slc6a21A0A1B0GSD2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Slc6a21A0A1B0GSD2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Slc6a21A0A1B0GSD2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Slc6a21A0A1B0GSD2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.37■■□□□ 1.65
Slc6a21A0A1B0GSD2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a21A0A1B0GSD2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Slc6a21A0A1B0GSD2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Slc6a21A0A1B0GSD2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a21A0A1B0GSD2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.34■■□□□ 1.65
Slc6a21A0A1B0GSD2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Slc6a21A0A1B0GSD2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.33■■□□□ 1.65
Slc6a21A0A1B0GSD2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Slc6a21A0A1B0GSD2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Slc6a21A0A1B0GSD2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Slc6a21A0A1B0GSD2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slc6a21A0A1B0GSD2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a21A0A1B0GSD2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a21A0A1B0GSD2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a21A0A1B0GSD2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.31■■□□□ 1.64
Slc6a21A0A1B0GSD2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Slc6a21A0A1B0GSD2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slc6a21A0A1B0GSD2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slc6a21A0A1B0GSD2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a21A0A1B0GSD2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a21A0A1B0GSD2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.29■■□□□ 1.64
Slc6a21A0A1B0GSD2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.29■■□□□ 1.64
Slc6a21A0A1B0GSD2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a21A0A1B0GSD2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a21A0A1B0GSD2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a21A0A1B0GSD2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a21A0A1B0GSD2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Slc6a21A0A1B0GSD2 Gm44428-201ENSMUST00000204474 874 ntBASIC25.27■■□□□ 1.64
Slc6a21A0A1B0GSD2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Slc6a21A0A1B0GSD2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.27■■□□□ 1.64
Slc6a21A0A1B0GSD2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Slc6a21A0A1B0GSD2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Slc6a21A0A1B0GSD2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Slc6a21A0A1B0GSD2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.24■■□□□ 1.63
Slc6a21A0A1B0GSD2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a21A0A1B0GSD2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a21A0A1B0GSD2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a21A0A1B0GSD2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a21A0A1B0GSD2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Slc6a21A0A1B0GSD2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms