Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Frmpd3A0A140LIW3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Frmpd3A0A140LIW3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Frmpd3A0A140LIW3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Frmpd3A0A140LIW3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.58■■■□□ 2.17
Frmpd3A0A140LIW3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Frmpd3A0A140LIW3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Frmpd3A0A140LIW3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Frmpd3A0A140LIW3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Frmpd3A0A140LIW3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.57■■■□□ 2.16
Frmpd3A0A140LIW3 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.57■■■□□ 2.16
Frmpd3A0A140LIW3 Terc-201ENSMUST00000082862 423 ntBASIC28.57■■■□□ 2.16
Frmpd3A0A140LIW3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Frmpd3A0A140LIW3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Frmpd3A0A140LIW3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Frmpd3A0A140LIW3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Frmpd3A0A140LIW3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Frmpd3A0A140LIW3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.55■■■□□ 2.16
Frmpd3A0A140LIW3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Frmpd3A0A140LIW3 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.53■■■□□ 2.16
Frmpd3A0A140LIW3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Frmpd3A0A140LIW3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Frmpd3A0A140LIW3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 Gm43566-201ENSMUST00000196851 808 ntBASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
Frmpd3A0A140LIW3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Frmpd3A0A140LIW3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Frmpd3A0A140LIW3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Frmpd3A0A140LIW3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Frmpd3A0A140LIW3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Frmpd3A0A140LIW3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Frmpd3A0A140LIW3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.48■■■□□ 2.15
Frmpd3A0A140LIW3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.48■■■□□ 2.15
Frmpd3A0A140LIW3 Gm15820-201ENSMUST00000201566 728 ntBASIC28.47■■■□□ 2.15
Frmpd3A0A140LIW3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Frmpd3A0A140LIW3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Frmpd3A0A140LIW3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
Frmpd3A0A140LIW3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Frmpd3A0A140LIW3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Frmpd3A0A140LIW3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.46■■■□□ 2.15
Frmpd3A0A140LIW3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.15
Frmpd3A0A140LIW3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
Frmpd3A0A140LIW3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Frmpd3A0A140LIW3 Gm13238-201ENSMUST00000117655 780 ntBASIC28.45■■■□□ 2.14
Frmpd3A0A140LIW3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Frmpd3A0A140LIW3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Frmpd3A0A140LIW3 Gm14117-201ENSMUST00000122417 843 ntBASIC28.43■■■□□ 2.14
Frmpd3A0A140LIW3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.43■■■□□ 2.14
Frmpd3A0A140LIW3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Frmpd3A0A140LIW3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Frmpd3A0A140LIW3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
Frmpd3A0A140LIW3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Frmpd3A0A140LIW3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Frmpd3A0A140LIW3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.39■■■□□ 2.14
Frmpd3A0A140LIW3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Frmpd3A0A140LIW3 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.39■■■□□ 2.14
Frmpd3A0A140LIW3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Frmpd3A0A140LIW3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.39■■■□□ 2.13
Frmpd3A0A140LIW3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.39■■■□□ 2.13
Frmpd3A0A140LIW3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Frmpd3A0A140LIW3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.38■■■□□ 2.13
Frmpd3A0A140LIW3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Frmpd3A0A140LIW3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Frmpd3A0A140LIW3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Frmpd3A0A140LIW3 Rps24-207ENSMUST00000224568 714 ntBASIC28.36■■■□□ 2.13
Frmpd3A0A140LIW3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Frmpd3A0A140LIW3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Frmpd3A0A140LIW3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Frmpd3A0A140LIW3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Frmpd3A0A140LIW3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Frmpd3A0A140LIW3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Frmpd3A0A140LIW3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.34■■■□□ 2.13
Frmpd3A0A140LIW3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.34■■■□□ 2.13
Frmpd3A0A140LIW3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
Frmpd3A0A140LIW3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Frmpd3A0A140LIW3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Frmpd3A0A140LIW3 Gm45444-201ENSMUST00000211394 898 ntBASIC28.32■■■□□ 2.12
Frmpd3A0A140LIW3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.3■■■□□ 2.12
Frmpd3A0A140LIW3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Frmpd3A0A140LIW3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.3■■■□□ 2.12
Frmpd3A0A140LIW3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Frmpd3A0A140LIW3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Frmpd3A0A140LIW3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Frmpd3A0A140LIW3 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.29■■■□□ 2.12
Frmpd3A0A140LIW3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.29■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms