Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.16■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-53A0A0G2JFC6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Igkv4-53A0A0G2JFC6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gm6821-201ENSMUST00000107540 542 ntBASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.12■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Particl-201ENSMUST00000205370 1560 ntBASIC16.11■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.1■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv4-53A0A0G2JFC6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv4-53A0A0G2JFC6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.06■□□□□ 0.16
Igkv4-53A0A0G2JFC6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.05■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Gm8503-201ENSMUST00000118131 455 ntBASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.02■□□□□ 0.16
Igkv4-53A0A0G2JFC6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-53A0A0G2JFC6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms