Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav3n-3A0A0G2JEM0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3n-3A0A0G2JEM0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav3n-3A0A0G2JEM0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav3n-3A0A0G2JEM0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3n-3A0A0G2JEM0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.11■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3n-3A0A0G2JEM0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms