Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-4A0A075B6C1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav7-4A0A075B6C1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trav7-4A0A075B6C1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-4A0A075B6C1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-4A0A075B6C1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-4A0A075B6C1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-4A0A075B6C1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-4A0A075B6C1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-4A0A075B6C1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-4A0A075B6C1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-4A0A075B6C1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-4A0A075B6C1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav7-4A0A075B6C1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-4A0A075B6C1 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.49■□□□□ 0.39
Trav7-4A0A075B6C1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-4A0A075B6C1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav7-4A0A075B6C1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-4A0A075B6C1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-4A0A075B6C1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-4A0A075B6C1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-4A0A075B6C1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-4A0A075B6C1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-4A0A075B6C1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-4A0A075B6C1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-4A0A075B6C1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-4A0A075B6C1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav7-4A0A075B6C1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-4A0A075B6C1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-4A0A075B6C1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-4A0A075B6C1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.44■□□□□ 0.38
Trav7-4A0A075B6C1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-4A0A075B6C1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7-4A0A075B6C1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-4A0A075B6C1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-4A0A075B6C1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-4A0A075B6C1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-4A0A075B6C1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-4A0A075B6C1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.42■□□□□ 0.38
Trav7-4A0A075B6C1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav7-4A0A075B6C1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav7-4A0A075B6C1 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.41■□□□□ 0.38
Trav7-4A0A075B6C1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7-4A0A075B6C1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-4A0A075B6C1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-4A0A075B6C1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trav7-4A0A075B6C1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
Trav7-4A0A075B6C1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-4A0A075B6C1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-4A0A075B6C1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms