Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.99■□□□□ 0.31
Trav6n-6A0A075B6B2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6n-6A0A075B6B2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6n-6A0A075B6B2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6n-6A0A075B6B2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-6A0A075B6B2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-6A0A075B6B2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-6A0A075B6B2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6n-6A0A075B6B2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6n-6A0A075B6B2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav6n-6A0A075B6B2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav6n-6A0A075B6B2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-6A0A075B6B2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6n-6A0A075B6B2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6n-6A0A075B6B2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav6n-6A0A075B6B2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.93■□□□□ 0.3
Trav6n-6A0A075B6B2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-6A0A075B6B2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6n-6A0A075B6B2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-6A0A075B6B2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-6A0A075B6B2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-6A0A075B6B2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-6A0A075B6B2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6n-6A0A075B6B2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav6n-6A0A075B6B2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6n-6A0A075B6B2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-6A0A075B6B2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-6A0A075B6B2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-6A0A075B6B2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6n-6A0A075B6B2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6n-6A0A075B6B2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-6A0A075B6B2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6n-6A0A075B6B2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-6A0A075B6B2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-6A0A075B6B2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6n-6A0A075B6B2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-6A0A075B6B2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6n-6A0A075B6B2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6n-6A0A075B6B2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6n-6A0A075B6B2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-6A0A075B6B2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-6A0A075B6B2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-6A0A075B6B2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6n-6A0A075B6B2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6n-6A0A075B6B2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6n-6A0A075B6B2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav6n-6A0A075B6B2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.83■□□□□ 0.28
Trav6n-6A0A075B6B2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6n-6A0A075B6B2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-6A0A075B6B2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms