Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16d-dv11A0A075B617 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16d-dv11A0A075B617 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav16d-dv11A0A075B617 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16d-dv11A0A075B617 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trav16d-dv11A0A075B617 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16d-dv11A0A075B617 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16d-dv11A0A075B617 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav16d-dv11A0A075B617 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16d-dv11A0A075B617 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav16d-dv11A0A075B617 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Trav16d-dv11A0A075B617 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16d-dv11A0A075B617 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16d-dv11A0A075B617 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16d-dv11A0A075B617 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16d-dv11A0A075B617 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16d-dv11A0A075B617 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16d-dv11A0A075B617 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav16d-dv11A0A075B617 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav16d-dv11A0A075B617 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav16d-dv11A0A075B617 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav16d-dv11A0A075B617 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16d-dv11A0A075B617 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16d-dv11A0A075B617 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16d-dv11A0A075B617 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trav16d-dv11A0A075B617 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16d-dv11A0A075B617 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16d-dv11A0A075B617 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16d-dv11A0A075B617 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16d-dv11A0A075B617 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16d-dv11A0A075B617 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16d-dv11A0A075B617 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16d-dv11A0A075B617 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16d-dv11A0A075B617 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Gm26115-201ENSMUST00000175605 87 ntBASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16d-dv11A0A075B617 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16d-dv11A0A075B617 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16d-dv11A0A075B617 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16d-dv11A0A075B617 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav16d-dv11A0A075B617 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16d-dv11A0A075B617 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16d-dv11A0A075B617 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav16d-dv11A0A075B617 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav16d-dv11A0A075B617 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16d-dv11A0A075B617 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16d-dv11A0A075B617 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms