Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4n-4A0A075B615 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav4n-4A0A075B615 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav4n-4A0A075B615 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4n-4A0A075B615 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4n-4A0A075B615 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4n-4A0A075B615 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4n-4A0A075B615 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4n-4A0A075B615 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav4n-4A0A075B615 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4n-4A0A075B615 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4n-4A0A075B615 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4n-4A0A075B615 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4n-4A0A075B615 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4n-4A0A075B615 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav4n-4A0A075B615 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4n-4A0A075B615 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4n-4A0A075B615 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4n-4A0A075B615 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4n-4A0A075B615 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4n-4A0A075B615 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav4n-4A0A075B615 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4n-4A0A075B615 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4n-4A0A075B615 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4n-4A0A075B615 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4n-4A0A075B615 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4n-4A0A075B615 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4n-4A0A075B615 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4n-4A0A075B615 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav4n-4A0A075B615 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4n-4A0A075B615 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4n-4A0A075B615 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.93■□□□□ 0.14
Trav4n-4A0A075B615 Gm25262-201ENSMUST00000174934 133 ntBASIC15.93■□□□□ 0.14
Trav4n-4A0A075B615 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4n-4A0A075B615 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4n-4A0A075B615 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4n-4A0A075B615 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4n-4A0A075B615 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav4n-4A0A075B615 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4n-4A0A075B615 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms