Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav5-1A0A075B5Z7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trav5-1A0A075B5Z7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Trav5-1A0A075B5Z7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav5-1A0A075B5Z7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav5-1A0A075B5Z7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav5-1A0A075B5Z7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav5-1A0A075B5Z7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav5-1A0A075B5Z7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav5-1A0A075B5Z7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav5-1A0A075B5Z7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.8■□□□□ 0.76
Trav5-1A0A075B5Z7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trav5-1A0A075B5Z7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trav5-1A0A075B5Z7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trav5-1A0A075B5Z7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav5-1A0A075B5Z7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav5-1A0A075B5Z7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav5-1A0A075B5Z7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5-1A0A075B5Z7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Gm16437-201ENSMUST00000025669 507 ntBASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5-1A0A075B5Z7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5-1A0A075B5Z7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5-1A0A075B5Z7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav5-1A0A075B5Z7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5-1A0A075B5Z7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5-1A0A075B5Z7 Terc-201ENSMUST00000082862 423 ntBASIC19.74■□□□□ 0.75
Trav5-1A0A075B5Z7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav5-1A0A075B5Z7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav5-1A0A075B5Z7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5-1A0A075B5Z7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5-1A0A075B5Z7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5-1A0A075B5Z7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5-1A0A075B5Z7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5-1A0A075B5Z7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav5-1A0A075B5Z7 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.72■□□□□ 0.75
Trav5-1A0A075B5Z7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav5-1A0A075B5Z7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav5-1A0A075B5Z7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.71■□□□□ 0.75
Trav5-1A0A075B5Z7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav5-1A0A075B5Z7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.71■□□□□ 0.75
Trav5-1A0A075B5Z7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5-1A0A075B5Z7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav5-1A0A075B5Z7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trav5-1A0A075B5Z7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav5-1A0A075B5Z7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.69■□□□□ 0.74
Trav5-1A0A075B5Z7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav5-1A0A075B5Z7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav5-1A0A075B5Z7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav5-1A0A075B5Z7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav5-1A0A075B5Z7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.67■□□□□ 0.74
Trav5-1A0A075B5Z7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav5-1A0A075B5Z7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav5-1A0A075B5Z7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.66■□□□□ 0.74
Trav5-1A0A075B5Z7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav5-1A0A075B5Z7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trav5-1A0A075B5Z7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5-1A0A075B5Z7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav5-1A0A075B5Z7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.63■□□□□ 0.73
Trav5-1A0A075B5Z7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav5-1A0A075B5Z7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav5-1A0A075B5Z7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5-1A0A075B5Z7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5-1A0A075B5Z7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5-1A0A075B5Z7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5-1A0A075B5Z7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav5-1A0A075B5Z7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms