RNA–Protein interactions for RNA: ENST00000496887.6
Retrieved 4 of 4 RNA–protein pairs in 3.1 ms
KCNQ1-205, Transcript of potassium voltage-gated channel subfamily Q member 1, human
TSL 5
Gene KCNQ1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
KCNQ1-205 | ENST00000496887 | RPS11 | P62280 | 158 aa | Known RBP eCLIP | 13.82 | □□□□□ -0.2 | 2e-8 | ■■■■■ 63.3 |
KCNQ1-205 | ENST00000496887 | DGCR8 | Q8WYQ5 | 773 aa | Known RBP eCLIP | 15.88 | ■□□□□ 0.13 | 9e-7 | ■■■■■ 65.6 |
KCNQ1-205 | ENST00000496887 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 18.04 | ■□□□□ 0.48 | 2e-6 | ■■■■■ 96.1 |
KCNQ1-205 | ENST00000496887 | XRN2 | Q9H0D6 | 950 aa | Known RBP eCLIP | 19.86 | ■□□□□ 0.77 | 3e-6 | ■■■■□ 19.8 |