RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SP140Q13342 867 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 TCEA2Q15560 299 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 PDK4Q16654 411 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 ZYG11AQ6WRX3 759 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 FRA10AC1Q70Z53 315 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 AMZ2Q86W34 360 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-205ENST00000473879 NRROSQ86YC3 692 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 NUDCD3Q8IVD9 361 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 SLC22A9Q8IVM8 553 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 ZNF547Q8IVP9 402 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 KYQ8NBH2 561 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 CCL4L1Q8NHW4 92 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 RAB3IL1Q8TBN0 382 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 CKAP2Q8WWK9 683 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 PTERQ96BW5 349 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 MAGEB18Q96M61 343 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 TIMM29Q9BSF4 260 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 GSDMCQ9BYG8 508 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 UNKQ9C0B0 810 aaKnown RBP12.94□□□□□ -0.34
BRAT1-205ENST00000473879 NRSN2Q9GZP1 204 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 CCDC134Q9H6E4 229 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 COG4Q9H9E3 785 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 SIRPGQ9P1W8 387 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 CPSF2Q9P2I0 782 aaKnown RBP12.94□□□□□ -0.34
BRAT1-205ENST00000473879 GULP1Q9UBP9 304 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 FAM8A1Q9UBU6 413 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 ZNHIT2Q9UHR6 403 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 RNF112Q9ULX5 631 aa12.94□□□□□ -0.34
BRAT1-205ENST00000473879 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 TARM1B6A8C7 271 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 C8GP07360 202 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 ENO2P09104 434 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 TPBGLP0DKB5 382 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 ATP5F1P24539 256 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 GNPDA1P46926 289 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 GNGT1P63211 74 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 DMPKQ09013 629 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 ILF3Q12906 894 aaKnown RBP eCLIP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 RTP5Q14D33 572 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PCLAFQ15004 111 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 OR4D1Q15615 310 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PLA2G4EQ3MJ16 856 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PERM1Q5SV97 790 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 XKR5Q6UX68 686 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 NAPRTQ6XQN6 538 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PIWIL4Q7Z3Z4 852 aaKnown RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 C11orf96Q7Z7L8 435 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PROSER1Q86XN7 944 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 SLC22A15Q8IZD6 547 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 PPP1R14CQ8TAE6 165 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 WDR48Q8TAF3 677 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 SKA2Q8WVK7 121 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 NXPE2Q96DL1 559 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 FOPNLQ96NB1 174 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 DEPDC7Q96QD5 511 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 OR2M4Q96R27 311 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 CCDC3Q9BQI4 270 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 DPEP2Q9H4A9 486 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
BRAT1-205ENST00000473879 CDYLQ9Y232 598 aa12.93□□□□□ -0.34
BRAT1-205ENST00000473879 CHD6Q8TD26 2715 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CELSR3Q9NYQ7 3312 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 A6NCN8 305 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 SUPT3HB4E1H0 165 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 G3V2L1 256 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 TAF4O00268 1085 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CDC7O00311 574 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 SLC16A5O15375 505 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 NOBOXO60393 691 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 SUPT3HO75486 399 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 S100BP04271 92 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-205ENST00000473879 PNLIPP16233 465 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 GLB1P16278 677 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CYP2A7P20853 494 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 NFKB2Q00653 900 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CTBSQ01459 385 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-205ENST00000473879 C14orf28Q4W4Y0 310 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 LIPMQ5VYY2 423 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 GPSM1Q86YR5 675 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 EXT2Q93063 718 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 GRAMD1AQ96CP6 724 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 ATOH8Q96SQ7 321 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 MECRQ9BV79 373 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 NUDT4Q9NZJ9 180 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 ACSL5Q9ULC5 683 aa12.92□□□□□ -0.34
BRAT1-205ENST00000473879 PRKAB1Q9Y478 270 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms