RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RALGPS2Q86X27 583 aaPredicted RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 ZSWIM9Q86XI8 627 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 RAVER1Q8IY67 606 aaKnown RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 ZNF786Q8N393 782 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 KREMEN2Q8NCW0 462 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CSGALNACT1Q8TDX6 532 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CYGBQ8WWM9 190 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 SELENOMQ8WWX9 145 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 ATL1Q8WXF7 558 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 AUTS2Q8WXX7 1259 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 AURKBQ96GD4 344 aaPredicted RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 VPS50Q96JG6 964 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CNDP2Q96KP4 475 aaKnown RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 OR52E6Q96RD3 313 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 YME1L1Q96TA2 773 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 SEPHS2Q99611 448 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 GFYI3L273 518 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 SCAMP3O14828 347 aaKnown RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 FFAR3O14843 346 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 GPR42O15529 346 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 FGF18O76093 207 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 RECQL5O94762 991 aaPredicted RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 PABPC1P11940 636 aaKnown RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 BCKDHAP12694 445 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 GKP32189 559 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 GDF5P43026 501 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 SLC6A12P48065 614 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 MTPNP58546 118 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 ADARB1P78563 741 aaKnown RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 DAG1Q14118 895 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CYBRD1Q53TN4 286 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CCNYL2Q5T2Q4 361 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 LIPJQ5W064 366 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 ELMSAN1Q6PJG2 1045 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 ZDHHC13Q8IUH4 622 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 HS6ST3Q8IZP7 471 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 ZNF548Q8NEK5 533 aaPredicted RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 MAGEE2Q8TD90 523 aaPredicted RBP17.65■□□□□ 0.42
CD40-201ENST00000372276 ASZ1Q8WWH4 475 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 OTUB2Q96DC9 234 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 LRIG1Q96JA1 1093 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 TUBA1CQ9BQE3 449 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 SLC46A2Q9BY10 475 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 DNAJC11Q9NVH1 559 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CLEC4EQ9ULY5 219 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 INVSQ9Y283 1065 aa17.65■□□□□ 0.42
CD40-201ENST00000372276 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 TRMUO75648 421 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 HLA-FP30511 346 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 VIPR1P32241 457 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 CA5AP35218 305 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 NNMTP40261 264 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 YBX1P67809 324 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 BIRC2Q13490 618 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 C11orf91Q3C1V1 193 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 ADHFE1Q8IWW8 467 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 MICU2Q8IYU8 434 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 CMTM8Q8IZV2 173 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 EID3Q8N140 333 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 ZNF420Q8TAQ5 688 aaPredicted RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 RPL10LQ96L21 214 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 ZDHHC6Q9H6R6 413 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 DDX18Q9NVP1 670 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 VAPAQ9P0L0 249 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 ADGRE2Q9UHX3 823 aa17.64■□□□□ 0.41
CD40-201ENST00000372276 TSR3Q9UJK0 312 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 HELZP42694 1942 aaKnown RBP17.64■□□□□ 0.41
CD40-201ENST00000372276 TRBV5-3A0A0A0MS03 114 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 A0A1W2PRU2 124 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 EME2A4GXA9 379 aaPredicted RBP17.63■□□□□ 0.41
CD40-201ENST00000372276 WNT9AO14904 365 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 CXCL14O95715 111 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 ASLP04424 464 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 C1SP09871 688 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 ETS2P15036 469 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 NRIP1P48552 1158 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 TRPC1P48995 793 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 CCR3P51677 355 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 EPHA5P54756 1037 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 ARSFP54793 590 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 NUP107P57740 925 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 HMGCS1Q01581 520 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 CSTF3Q12996 717 aaKnown RBP17.63■□□□□ 0.41
CD40-201ENST00000372276 PTGR1Q14914 329 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 RFX4Q33E94 735 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 PLA2G4EQ3MJ16 856 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 DPY19L3Q6ZPD9 716 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 ADGRG2Q8IZP9 1017 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 TRAM1L1Q8N609 369 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 BEND7Q8N7W2 519 aaPredicted RBP17.63■□□□□ 0.41
CD40-201ENST00000372276 SLC22A17Q8WUG5 538 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 FBXL8Q96CD0 374 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 VWCEQ96DN2 955 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 CCDC97Q96F63 343 aaPredicted RBP17.63■□□□□ 0.41
CD40-201ENST00000372276 FAM83CQ9BQN1 747 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 HEPHQ9BQS7 1158 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms