RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.78□□□□□ -0.52
USF1-203ENST00000368021 TCAIMQ8N3R3 496 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 OXR1Q8N573 874 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 MCOLN3Q8TDD5 553 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 SKA2Q8WVK7 121 aaPredicted RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 NELL1Q92832 810 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 RHBDF1Q96CC6 855 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 CD93Q9NPY3 652 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 EBF1Q9UH73 591 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 PDE10AQ9Y233 779 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 EP300Q09472 2414 aaPredicted RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 PABPN1LA6NDY0 278 aaKnown RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 LRRC14BA6NHZ5 514 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 TRPC5OSA6NMA1 111 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 GRID2O43424 1007 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 LATO43561 262 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 POP7O75817 140 aaKnown RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 HIST1H2AGP0C0S8 130 aaPredicted RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 HIST1H2ADP20671 130 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 SERPINB3P29508 390 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 GGT5P36269 586 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 IDH3AP50213 366 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 CDH13P55290 713 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 SH3BP2P78314 561 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 RPA4Q13156 261 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 ADRM1Q16186 407 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 GALNTL6Q49A17 601 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 MTDHQ86UE4 582 aaKnown RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 OR56A4Q8NGH8 313 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 AGR3Q8TD06 166 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 KLK6Q92876 244 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 FOXJ1Q92949 421 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 ERP27Q96DN0 273 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 HIST1H2AHQ96KK5 128 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 FOPNLQ96NB1 174 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 NSUN5Q96P11 429 aaKnown RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 GBP5Q96PP8 586 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.52
USF1-203ENST00000368021 HIST1H2AJQ99878 128 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 EGFL8Q99944 293 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 CENPKQ9BS16 269 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 H2AFJQ9BTM1 129 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 SHCBP1LQ9BZQ2 653 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 GALNT8Q9NY28 637 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 STK38LQ9Y2H1 464 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 TMEM98Q9Y2Y6 226 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 OR1A2Q9Y585 309 aa11.77□□□□□ -0.52
USF1-203ENST00000368021 ABCA7Q8IZY2 2146 aa11.77□□□□□ -0.53
USF1-203ENST00000368021 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
USF1-203ENST00000368021 H3BM21 787 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 KMOO15229 486 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 TAPBPO15533 448 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CCDC22O60826 627 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SEMA4FO95754 770 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 GUCA1CO95843 209 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SERPINA6P08185 405 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CALB2P22676 271 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 OXTRP30559 389 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 MAT2AP31153 395 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 HOXA6P31267 233 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 NBL1P41271 181 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 PREPP48147 710 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 RASSF2P50749 326 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 TUBB3Q13509 450 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SIM2Q14190 667 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 WASHC2DQ5SRD0 308 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 METTL21CQ5VZV1 264 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 FAM91A1Q658Y4 838 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 XKR5Q6UX68 686 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CEP68Q76N32 757 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CLNKQ7Z7G1 428 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 AMZ2Q86W34 360 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CFAP206Q8IYR0 622 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CLYBLQ8N0X4 340 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CHCHD4Q8N4Q1 142 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 LILRA3Q8N6C8 439 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 FBXO15Q8NCQ5 510 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 MAPK15Q8TD08 544 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 TRPC4APQ8TEL6 797 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 RILPQ96NA2 401 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ZNF382Q96SR6 550 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CD244Q9BZW8 370 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 MYLK2Q9H1R3 596 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ZBTB26Q9HCK0 441 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ARL15Q9NXU5 204 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 WWOXQ9NZC7 414 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 EIF2B4Q9UI10 523 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 ZFP69BQ9UJL9 534 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SLC17A4Q9Y2C5 497 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 GIPC1O14908 333 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SLC31A1O15431 190 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 PFDN1O60925 122 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ZNF217O75362 1048 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ESRRBO95718 433 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CATP04040 527 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms