RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 GPSM3Q9Y4H4 160 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 CCRL2O00421 344 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 IFRD1O00458 451 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 ANKRD28O15084 1053 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 MLYCDO95822 493 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 HOXB8P17481 243 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 PNPLA4P41247 253 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SV2CQ496J9 727 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 UBXN11Q5T124 520 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 NXNL2Q5VZ03 156 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 TIGD7Q6NT04 549 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 AHSA2Q719I0 299 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 GPR149Q86SP6 731 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SLAIN1Q8ND83 568 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SUN5Q8TC36 379 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 HCAR2Q8TDS4 363 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 NCLNQ969V3 563 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 TBATAQ96M53 351 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 APOL4Q9BPW4 351 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 NUAK2Q9H093 628 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 NCF1BA6NI72 391 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 NCF1CA8MVU1 366 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 AP3D1O14617 1153 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 OR4F21O95013 312 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 SNX4O95219 450 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 NCF1P14598 390 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 EFNA1P20827 205 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 ENDOUP21128 410 aaKnown RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 SOX4Q06945 474 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 MGAT3Q09327 533 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 SEMA3AQ14563 771 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 GPRIN3Q6ZVF9 776 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 C11orf74Q86VG3 221 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 PEX5LQ8IYB4 626 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CDYL2Q8N8U2 506 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 DCBLD1Q8N8Z6 715 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 DMRTB1Q96MA1 342 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 GABARAPL1Q9H0R8 117 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 TMEM30AQ9NV96 361 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CCDC59Q9P031 241 aaKnown RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 GALPQ9UBC7 116 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 A8MV72 311 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 M0R082 166 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CRYZL1O95825 349 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 SERPINF2P08697 491 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 DDOSTP39656 456 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CTSKP43235 329 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 DAPP51397 102 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CPZQ66K79 652 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 IPCEF1Q8WWN9 437 aaPredicted RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 AARSD1Q9BTE6 412 aaKnown RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 C1QTNF3Q9BXJ4 246 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 PLSCR3Q9NRY6 295 aa17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
CDKN1B-201ENST00000228872 CDC7O00311 574 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 STX16O14662 325 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CREG1O75629 220 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 SERPINA1P01009 418 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 RETP07949 1114 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CD86P42081 329 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 NRIP1P48552 1158 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 P2RX3P56373 397 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 KIAA0040Q15053 153 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 RAB41Q5JT25 222 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 OR56A4Q8NGH8 313 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 ZNF296Q8WUU4 475 aaPredicted RBP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 DERL2Q9GZP9 239 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 POLR3HQ9Y535 204 aaPredicted RBP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 IPPQ9Y573 584 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 GLP2RO95838 553 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CCR1P32246 355 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CARD16Q5EG05 197 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 PAQR3Q6TCH7 311 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CEP68Q76N32 757 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 MSRB3Q8IXL7 192 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 SLC13A3Q8WWT9 602 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 ESAMQ96AP7 390 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CLPBQ9H078 707 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 CRTAC1Q9NQ79 661 aa17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 NDRG4Q9ULP0 352 aaKnown RBP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDKN1B-201ENST00000228872 MOXD2PA6NHM9 499 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 CD3EAPO15446 510 aaKnown RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 LDB2O43679 373 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 SEMA3DO95025 777 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 INHAP05111 366 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 KCNE1P15382 129 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 HTR6P50406 440 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 MAXP61244 160 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 XKR4Q5GH76 650 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 TTC29Q8NA56 475 aaPredicted RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 ARRDC4Q8NCT1 418 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 ELMO1Q92556 727 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms