RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CCDC38Q502W7 563 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 PLEKHS1Q5SXH7 462 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 LYPLAL1Q5VWZ2 237 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CREG2Q8IUH2 290 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 DSELQ8IZU8 1212 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CPT1BQ92523 772 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CCM2Q9BSQ5 444 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CHST8Q9H2A9 424 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 FANCEQ9HB96 536 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 C1GALT1Q9NS00 363 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 ZDHHC3Q9NYG2 299 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 POMT2Q9UKY4 750 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 HEBP2Q9Y5Z4 205 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 NBASA2RRP1 2371 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CCDC188H7C350 402 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 GNLYP22749 145 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 PPARGP37231 505 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 PTGIRP43119 386 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 CCL11P51671 97 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 ETF1P62495 437 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 CHAF1BQ13112 559 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 PRKAA1Q13131 559 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 NADK2Q4G0N4 442 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 FHL5Q5TD97 284 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 AFTPHQ6ULP2 937 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 HPS6Q86YV9 775 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 RMDN2Q96LZ7 410 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 PPM1MQ96MI6 270 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 NLNQ9BYT8 704 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 FAM96AQ9H5X1 160 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 SOHLH2Q9NX45 425 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 PCYOX1Q9UHG3 505 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 ZNF451Q9Y4E5 1061 aa17.02■□□□□ 0.32
SHKBP1-203ENST00000594298 TRBV5-4A0A0C4DH59 114 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 C17orf113A0A1B0GUU1 675 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 CCDC78A2IDD5 438 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 F8W8V4 182 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 CCL22O00626 93 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 MLNP12872 115 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 POLR2CP19387 275 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 ACRV1P26436 265 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 PRLHRP49683 370 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 PRAMEP78395 509 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 ABRQ12979 859 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 KCNJ11Q14654 390 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 C4orf17Q53FE4 359 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 ZNF789Q5FWF6 425 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 LCN10Q6JVE6 187 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 FBXO38Q6PIJ6 1188 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 PCGF5Q86SE9 256 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 LURAP1LQ8IV03 231 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 CFAP206Q8IYR0 622 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 ENDOVQ8N8Q3 282 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 MCUQ8NE86 351 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 OR4E2Q8NGC2 313 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 OR6P1Q8NGX9 317 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 HM13Q8TCT9 377 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 SLCO2A1Q92959 643 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 HDAC10Q969S8 669 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 DDX47Q9H0S4 455 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 VPS37BQ9H9H4 285 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 ANAPC5Q9UJX4 755 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 TCFL5Q9UL49 500 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 SNX7Q9UNH6 387 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 NEU2Q9Y3R4 380 aa17.01■□□□□ 0.31
SHKBP1-203ENST00000594298 MAGEB16A2A368 324 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 CCDC162PA2VCL2 907 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 SLC9B1P1A6NJY1 282 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 QSOX1O00391 747 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 TMEM63AO94886 807 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 AGFG2O95081 481 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 POLBP06746 335 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 CAPN1P07384 714 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
SHKBP1-203ENST00000594298 CDH3P22223 829 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 ARCN1P48444 511 aaKnown RBP17■□□□□ 0.31
SHKBP1-203ENST00000594298 TERF1P54274 439 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 ACVR1Q04771 509 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 KRT33BQ14525 404 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 ITIH4Q14624 930 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 FASTKD1Q53R41 847 aaKnown RBP17■□□□□ 0.31
SHKBP1-203ENST00000594298 PRAMEF17Q5VTA0 474 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 LILRA3Q8N6C8 439 aaPredicted RBP17■□□□□ 0.31
SHKBP1-203ENST00000594298 OR13J1Q8NGT2 312 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 OR4L1Q8NH43 312 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 NAT14Q8WUY8 206 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 CLIP3Q96DZ5 547 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 SGSM3Q96HU1 749 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 PITPNM3Q9BZ71 974 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 MRM3Q9HC36 420 aaKnown RBP17■□□□□ 0.31
SHKBP1-203ENST00000594298 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 PCMTD2Q9NV79 361 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 ASIC3Q9UHC3 531 aa17■□□□□ 0.31
SHKBP1-203ENST00000594298 IGLV3-16A0A075B6K0 115 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms