RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 MRNIPQ6NTE8 343 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 DUS1LQ6P1R4 473 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 FAM199XQ6PEV8 388 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 SPESP1Q6UW49 350 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ZNF517Q6ZMY9 492 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 OTOAQ7RTW8 1153 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 RAB43Q86YS6 212 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 PIANPQ8IYJ0 282 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ADGRF3Q8IZF5 1079 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TAB3Q8N5C8 712 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 EFCAB3Q8N7B9 438 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 GABPB2Q8TAK5 448 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ATG4AQ8WYN0 398 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 DLG3Q92796 817 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ZUFSPQ96AP4 578 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 RAD51AP1Q96B01 352 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 NACC2Q96BF6 587 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 FER1L6-AS2Q96M78 137 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 NAP1L3Q99457 506 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 NDC1Q9BTX1 674 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 HGH1Q9BTY7 390 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TLR10Q9BXR5 811 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 AP1M1Q9BXS5 423 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ING2Q9H160 280 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 CHST8Q9H2A9 424 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 CATSPERZQ9NTU4 200 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TXLNGQ9NUQ3 528 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 PIH1D1Q9NWS0 290 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 UTP6Q9NYH9 597 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 IL1RAPL1Q9NZN1 696 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 NDOR1Q9UHB4 597 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 GNPTGQ9UJJ9 305 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 PLCL2Q9UPR0 1127 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 R3HDM2Q9Y2K5 976 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 TCAF1Q9Y4C2 921 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 PCDHGA9Q9Y5G4 932 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 MRPS18BQ9Y676 258 aaKnown RBP6.31□□□□□ -1.4
FOXN3-205ENST00000553904 CAPN6Q9Y6Q1 641 aa6.31□□□□□ -1.4
FOXN3-205ENST00000553904 ARHGEF17Q96PE2 2063 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 A0A0J9YY10 115 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 TTLL8A6PVC2 850 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ZNF839A8K0R7 811 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 TARM1B6A8C7 271 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 BHMG1C9JSJ3 638 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CEP104O60308 925 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SRPX2O60687 465 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 DPM1O60762 260 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 VPS4BO75351 444 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 TMEM63AO94886 807 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SLCO2B1O94956 709 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 S1PR4O95977 384 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 FGGP02679 453 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CHRM5P08912 532 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ST6GAL1P15907 406 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 UGT2B7P16662 529 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ITGAXP20702 1163 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CD9P21926 228 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ALAS2P22557 587 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CCR7P32248 378 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 RPL22P35268 128 aaKnown RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 HSD17B2P37059 387 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 RAB28P51157 221 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 PGDP52209 483 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SESN2P58004 480 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 NFKB2Q00653 900 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ABRQ12979 859 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 GPS2Q13227 327 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 KYNUQ16719 465 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ZNF658BQ4V348 819 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 TCTE1Q5JU00 501 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 MLIPQ5VWP3 458 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 RHBDD2Q6NTF9 364 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 FBXO38Q6PIJ6 1188 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 UNC5DQ6UXZ4 953 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CDHR3Q6ZTQ4 885 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 LRRC8AQ8IWT6 810 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SYTL1Q8IYJ3 562 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SLC22A15Q8IZD6 547 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 ENDOVQ8N8Q3 282 aaKnown RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 C19orf47Q8N9M1 422 aaKnown RBP6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CLEC1AQ8NC01 280 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 OR5AR1Q8NGP9 310 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 OR13J1Q8NGT2 312 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 OR1L3Q8NH93 324 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 CFAP61Q8NHU2 1237 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 NAT14Q8WUY8 206 aa6.3□□□□□ -1.4
FOXN3-205ENST00000553904 SKA2Q8WVK7 121 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms