RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GDAP1Q8TB36 358 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 LMX1AQ8TE12 382 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ZFAND2BQ8WV99 257 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CPT1BQ92523 772 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GLYATL1Q969I3 302 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CDKN2AIPNLQ96HQ2 116 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 RUNDC3BQ96NL0 473 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 RANBP9Q96S59 729 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 LRRC61Q9BV99 259 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 DUSP23Q9BVJ7 150 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TMEM168Q9H0V1 697 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A7Q9HAW7 530 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A10Q9HAW8 530 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A8Q9HAW9 530 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CYP4F12Q9HCS2 524 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 NLE1Q9NVX2 485 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TRNAU1APQ9NX07 287 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 MOCS1Q9NZB8 636 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 VPS18Q9P253 973 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GMPR2Q9P2T1 348 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 APOBEC3BQ9UH17 382 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 MOSPD1Q9UJG1 213 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 APPL1Q9UKG1 709 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SATB2Q9UPW6 733 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 OAS3Q9Y6K5 1087 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 A0A096LPE4 126 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 A0A1W2PPZ6 126 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 HEATR9A2RTY3 570 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 GPR89AB7ZAQ6 455 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 LMO7DNF2Z398 122 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TRIM38O00635 465 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CHUKO15111 745 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TNFSF14O43557 240 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 VEGFDO43915 354 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 NUAK1O60285 661 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 SRP72O76094 671 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TGDSO95455 350 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 LDOC1O95751 146 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 BAG2O95816 211 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 GPR89BP0CG08 455 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 UBL4AP11441 157 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 MLNP12872 115 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 HSD3B1P14060 373 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ACPPP15309 386 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 NME2P22392 152 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CA5AP35218 305 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ADCY8P40145 1251 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 HAAOP46952 286 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF140P52738 457 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PLTPP55058 493 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 IL2P60568 153 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TUBA4AP68366 448 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ACVR1Q04771 509 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TMEM115Q12893 351 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CBX3Q13185 183 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CUL3Q13618 768 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PTK6Q13882 451 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TUBB8Q3ZCM7 444 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ANKDD1AQ495B1 522 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CCDC38Q502W7 563 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PYCR3Q53H96 274 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PCID2Q5JVF3 399 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 LDLRAP1Q5SW96 308 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TSTD2Q5T7W7 516 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ANKRD22Q5VYY1 191 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM180BQ6P0A1 224 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 TMEM53Q6P2H8 277 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM151BQ6UXP7 276 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 SYDE1Q6ZW31 735 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF534Q76KX8 674 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 NLRP9Q7RTR0 991 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF572Q7Z3I7 529 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ADGRG6Q86SQ4 1221 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CAND1Q86VP6 1230 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 GKN2Q86XP6 184 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 NAT8LQ8N9F0 302 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM181AQ8N9Y4 354 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF540Q8NDQ6 660 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 MCUQ8NE86 351 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 OR4C6Q8NH72 309 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CCL4L1Q8NHW4 92 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 GPBAR1Q8TDU6 330 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PEX13Q92968 403 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PDXPQ96GD0 296 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 MAELQ96JY0 434 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 PPM1MQ96MI6 270 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF778Q96MU6 729 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 NR1H4Q96RI1 486 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 KRT12Q99456 494 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CRB3Q9BUF7 120 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 IL22Q9GZX6 179 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ASB8Q9H765 288 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CARS2Q9HA77 564 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 ARFGAP3Q9NP61 516 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 CHRAC1Q9NRG0 131 aa6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 DDX18Q9NVP1 670 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-209ENST00000529214 SMOXQ9NWM0 555 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms