RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PREPP48147 710 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 DGKGP49619 791 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 LY6G5CQ5SRR4 150 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 INTS11Q5TA45 600 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CYP4Z1Q86W10 505 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 KRT78Q8N1N4 520 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SCML4Q8N228 414 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 GLB1L3Q8NCI6 653 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CSGALNACT1Q8TDX6 532 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SORCS1Q8WY21 1168 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 L3HYPDHQ96EM0 354 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 RBM4BQ9BQ04 359 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 HTATIP2Q9BUP3 242 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 RBM4Q9BWF3 364 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 RAD21L1Q9H4I0 556 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 NOL6Q9H6R4 1146 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 IMP3Q9NV31 184 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 DRGXA6NNA5 263 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 MAGEB17A8MXT2 336 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FADS2O95864 444 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 EPHX1P07099 455 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 OR4D2P58180 307 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ERVPABLB-1P60509 514 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 EMX2Q04743 252 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 TEAD2Q15562 447 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SLC44A4Q53GD3 710 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ZDHHC20Q5W0Z9 365 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ANKRD26P1Q6NSI1 321 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CNKSR3Q6P9H4 555 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 BLOC1S3Q6QNY0 202 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 TRIM74Q86UV6 250 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 RGL4Q8IZJ4 473 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CASD1Q96PB1 797 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ELAC1Q9H777 363 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 AIG1Q9NVV5 245 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 H2AFY2Q9P0M6 372 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PCTPQ9UKL6 214 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 RSL1D1O76021 490 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FGF18O76093 207 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ANGPTL1O95841 491 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FGBP02675 491 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CHRM1P11229 460 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CDH1P12830 882 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 CCL5P13501 91 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 TYRP14679 529 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 ALDH4A1P30038 563 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SERPINB1P30740 379 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PSMD8P48556 350 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 HTRA3P83110 453 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 DAG1Q14118 895 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FRG2Q64ET8 278 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PDE12Q6L8Q7 609 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 NCEH1Q6PIU2 408 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PHF10Q8WUB8 498 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FRG2BQ96QU4 278 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 YIPF2Q9BWQ6 316 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 SMURF2Q9HAU4 748 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 MAGEE1Q9HCI5 957 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 DDX28Q9NUL7 540 aaKnown RBP8.28□□□□□ -1.08
PTPRK-206ENST00000368215 PTTG2Q9NZH5 202 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 TESMINQ9Y4I5 508 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 FOCADQ5VW36 1801 aa8.28□□□□□ -1.08
PTPRK-206ENST00000368215 A6NHS1 94 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 ADH1CP00326 375 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 ATP1B2P14415 290 aaPredicted RBP8.27□□□□□ -1.08
PTPRK-206ENST00000368215 POU2F1P14859 743 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 CSF2RAP15509 400 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 CD70P32970 193 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 HMGCLP35914 325 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 BDKRB1P46663 353 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 ATP4BP51164 291 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 DSC1Q08554 894 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 MGAT3Q09327 533 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 ZC3H12BQ5HYM0 836 aaKnown RBP8.27□□□□□ -1.08
PTPRK-206ENST00000368215 PAGE3Q5JUK9 113 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 CCNYL2Q5T2Q4 361 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 LETMD1Q6P1Q0 360 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 MTSS1LQ765P7 747 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 GET4Q7L5D6 327 aaPredicted RBP8.27□□□□□ -1.08
PTPRK-206ENST00000368215 PATL1Q86TB9 770 aaKnown RBP8.27□□□□□ -1.08
PTPRK-206ENST00000368215 KLK6Q92876 244 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 LRCH3Q96II8 777 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 SLC29A1Q99808 456 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 AMBNQ9NP70 447 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 OGDHLQ9ULD0 1010 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.08
PTPRK-206ENST00000368215 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 ASB3Q9Y575 518 aa8.27□□□□□ -1.08
PTPRK-206ENST00000368215 EP400Q96L91 3159 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 A0A0G2JN53 185 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 C1QTNF3-AMACRE9PGA6 284 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 257.3 ms