RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 FBF1Q8TES7 1133 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 SNRNP27Q8WVK2 155 aaKnown RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 CCDC74AQ96AQ1 378 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 AARSD1Q9BTE6 412 aaKnown RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 WWP1Q9H0M0 922 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 ZFATQ9P243 1243 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 LRIT1Q9P2V4 623 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 FAM8A1Q9UBU6 413 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 SSUH2Q9Y2M2 353 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 ASH1LQ9NR48 2969 aaKnown RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 TENM4Q6N022 2769 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 KPNA5O15131 536 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 PIAS1O75925 651 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 SLCO2B1O94956 709 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 CD9P21926 228 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 ACADLP28330 430 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 PREPP48147 710 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 CLCN7P51798 805 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 RPE65Q16518 533 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 CLEC14AQ86T13 490 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 SLC9B2Q86UD5 537 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
VEGFA-222ENST00000520948 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 ASZ1Q8WWH4 475 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.7■□□□□ 0.425e-12■■■■■ 41.4
VEGFA-222ENST00000520948 KCNJ9Q92806 393 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 RMDN2Q96LZ7 410 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 NSMCE4AQ9NXX6 385 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 KLHL42Q9P2K6 505 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 CPNE7Q9UBL6 633 aa17.7■□□□□ 0.42
VEGFA-222ENST00000520948 COL6A6A6NMZ7 2263 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 OR52A4PA6NMU1 304 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 AGRPO00253 132 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 NTN3O00634 580 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-222ENST00000520948 ITGA2BP08514 1039 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 HGFP14210 728 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 STX2P32856 288 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 HALP42357 657 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 CCL7P80098 99 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 BRD3Q15059 726 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 KBTBD12Q3ZCT8 623 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 PLEKHS1Q5SXH7 462 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 RBM20Q5T481 1227 aaKnown RBP17.69■□□□□ 0.42
VEGFA-222ENST00000520948 STRA8Q7Z7C7 330 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 ZC3HC1Q86WB0 502 aaKnown RBP17.69■□□□□ 0.42
VEGFA-222ENST00000520948 VRK3Q8IV63 474 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 SLC22A15Q8IZD6 547 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 AVL9Q8NBF6 648 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 SLC30A3Q99726 388 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 UCK1Q9HA47 277 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-222ENST00000520948 DHRS7Q9Y394 339 aa17.69■□□□□ 0.42
VEGFA-222ENST00000520948 FLNBO75369 2602 aaKnown RBP17.68■□□□□ 0.42
VEGFA-222ENST00000520948 PRAMEF33A0A0G2JMD5 474 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 B8ZZF3 427 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 D6RAR5 112 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 PLD2O14939 933 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 B4GAT1O43505 415 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 RPLP0P05388 317 aaKnown RBP17.68■□□□□ 0.42
VEGFA-222ENST00000520948 APOA4P06727 396 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 CHRM3P20309 590 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 GPR3P46089 330 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 HHEXQ03014 270 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 HSPA14Q0VDF9 509 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 BOP1Q14137 746 aaKnown RBP17.68■□□□□ 0.42
VEGFA-222ENST00000520948 ERCC6LQ2NKX8 1250 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 WDR93Q6P2C0 686 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 FBXO39Q8N4B4 442 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 UBXN4Q92575 508 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 CDKL2Q92772 493 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 LIN37Q96GY3 246 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-222ENST00000520948 GFM1Q96RP9 751 aaKnown RBP17.68■□□□□ 0.42
VEGFA-222ENST00000520948 CPNE1Q99829 537 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 POT1Q9NUX5 634 aa17.68■□□□□ 0.42
VEGFA-222ENST00000520948 A0A1W2PQM1 296 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 VIPP01282 170 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 SLC35G4P0C7Q5 338 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 MTHFD1P11586 935 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 SLC5A2P31639 672 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 PHBP35232 272 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 MLLT3P42568 568 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 CSE1LP55060 971 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 VSNL1P62760 191 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 ILF2Q12905 390 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 SQSTM1Q13501 440 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 TRMT10CQ7L0Y3 403 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 RAB11FIP2Q7L804 512 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 OTOAQ7RTW8 1153 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 RBM12BQ8IXT5 1001 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 GSPT2Q8IYD1 628 aaKnown RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 ZFPM2Q8WW38 1151 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 SH3KBP1Q96B97 665 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 MED8Q96G25 268 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 C12orf66Q96MD2 445 aa17.67■□□□□ 0.42
VEGFA-222ENST00000520948 CCNL2Q96S94 520 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-222ENST00000520948 NDNQ99608 321 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms