RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ASNA1O43681 348 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 RNASEH1O60930 286 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CILPO75339 1184 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 IPO13O94829 963 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 AMHP03971 560 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 MMP2P08253 660 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 HOXD4P09016 255 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 SMIM6P0DI80 62 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ATF2P15336 505 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CD36P16671 472 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 MMP8P22894 467 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ARNTP27540 789 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 UQCRC1P31930 480 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 SERPINH1P50454 418 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ARF3P61204 181 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ARF1P84077 181 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 REEP5Q00765 189 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 DLG1Q12959 904 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 GRIK2Q13002 908 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 SLC39A6Q13433 755 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 RIN1Q13671 783 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 EMC2Q15006 297 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 OXA1LQ15070 435 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 FAM83EQ2M2I3 478 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CERKLQ49MI3 558 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 NADK2Q4G0N4 442 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 BCL7AQ4VC05 210 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 FLYWCH1Q4VC44 716 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ACTBL2Q562R1 376 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 PAN3Q58A45 887 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 RUNDC3AQ59EK9 446 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF484Q5JVG2 852 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 MANEALQ5VSG8 457 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 PEAR1Q5VY43 1037 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 METAP1DQ6UB28 335 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 SV2AQ7L0J3 742 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 HDDC2Q7Z4H3 204 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 LHFPL4Q7Z7J7 247 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 LUZP2Q86TE4 346 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 GPR180Q86V85 440 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 IQCHQ86VS3 1027 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CCDC105Q8IYK2 499 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 LRRC17Q8N6Y2 441 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 POGLUT1Q8NBL1 392 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM145Q8NBT3 493 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 EDARADDQ8WWZ3 215 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ATOH1Q92858 354 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ISG20Q96AZ6 181 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 FBXO17Q96EF6 278 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF479Q96JC4 524 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CASD1Q96PB1 797 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CITED2Q99967 270 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 WDR77Q9BQA1 342 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 PYM1Q9BRP8 204 aaKnown RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM246Q9BRR3 403 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 DERL2Q9GZP9 239 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
EPHA3-202ENST00000452448 WWP1Q9H0M0 922 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 HDHD2Q9H0R4 259 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 MS4A5Q9H3V2 200 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 OBP2BQ9NPH6 170 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 GJB4Q9NTQ9 266 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM140Q9NV12 185 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 TMEM184CQ9NVA4 438 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 IMPAD1Q9NX62 359 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CLEC2DQ9UHP7 191 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 ADAMTS6Q9UKP5 1117 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CA14Q9ULX7 337 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 CLCA2Q9UQC9 943 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 PPP2R2CQ9Y2T4 447 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 TESMINQ9Y4I5 508 aa4.89□□□□□ -1.63
EPHA3-202ENST00000452448 UMODL1Q5DID0 1318 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 EMSYQ7Z589 1322 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 WDR17Q8IZU2 1322 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 A0A1W2PP55 124 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 METTL21EPA6NDL7 271 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 FIGNL2A6NMB9 653 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF716A6NP11 495 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 M0QZ92 97 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 AURKAO14965 403 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 TGM5O43548 720 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 GDF9O60383 454 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 CNTN5O94779 1100 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 VNN2O95498 520 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 A1BGP04217 495 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 PCCAP05165 728 aaPredicted RBP4.88□□□□□ -1.63
EPHA3-202ENST00000452448 ZNF735P0CB33 412 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 OR8G3PP0DMU2 310 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 TSHRP16473 764 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 AKAP5P24588 427 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 PTPN6P29350 595 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 HIBADHP31937 336 aaKnown RBP4.88□□□□□ -1.63
EPHA3-202ENST00000452448 PREPP48147 710 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 DLG4P78352 724 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 MC1RQ01726 317 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 KCNMA1Q12791 1236 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 MAPK7Q13164 816 aa4.88□□□□□ -1.63
EPHA3-202ENST00000452448 KARSQ15046 597 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms