RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 AAGABQ6PD74 315 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 GCNT7Q6ZNI0 430 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 TRAPPC5Q8IUR0 188 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 DENND6BQ8NEG7 585 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 RFWD2Q8NHY2 731 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 STAG3L4Q8TBR4 150 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ZCCHC2Q9C0B9 1178 aaKnown RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 FAM8A1Q9UBU6 413 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 INVSQ9Y283 1065 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 SLC17A4Q9Y2C5 497 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 COMMD3-BMI1R4GMX3 469 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ABCA7Q8IZY2 2146 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 EIF3FO00303 357 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 KLK8O60259 260 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 POP7O75817 140 aaKnown RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 SERPINE1P05121 402 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CCR10P46092 362 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PREPP48147 710 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CLCN2P51788 898 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PRKAA2P54646 552 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PFN3P60673 137 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 DMWDQ09019 674 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 TTLL9Q3SXZ7 439 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 LIPMQ5VYY2 423 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 FAM83HQ6ZRV2 1179 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ZNF514Q96K75 400 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 SORT1Q99523 831 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 EIF4E1BA6NMX2 242 aaKnown RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 KPNA5O15131 536 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 LYPLA1O75608 230 aaPredicted RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 IPO13O94829 963 aaKnown RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 LYNP07948 512 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 ENO3P13929 434 aaPredicted RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 PBLDP30039 288 aaPredicted RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 RGS4P49798 205 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 NAGLUP54802 743 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 DNAJB13P59910 316 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 NFKB2Q00653 900 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 TGFBIQ15582 683 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 RPS27LQ71UM5 84 aaKnown RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 ST13P4Q8IZP2 240 aaPredicted RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 ASZ1Q8WWH4 475 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 ASB11Q8WXH4 323 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 EXT2Q93063 718 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 PHF21BQ96EK2 531 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 FAM126AQ9BYI3 521 aaPredicted RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 C1orf21Q9H246 121 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 MRPL40Q9NQ50 206 aaKnown RBP14.37□□□□□ -0.11
CXCL12-201ENST00000343575 NDE1Q9NXR1 346 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 MID2Q9UJV3 735 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 RNF112Q9ULX5 631 aa14.37□□□□□ -0.11
CXCL12-201ENST00000343575 C17orf113A0A1B0GUU1 675 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 FCHO1O14526 889 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 MATN4O95460 622 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 HOXC4P09017 264 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-201ENST00000343575 PIM1P11309 404 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-201ENST00000343575 SERPINB3P29508 390 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 ARHGAP8P85298 464 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 STX3Q13277 289 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 NFE2L1Q14494 772 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 PLA2G4EQ3MJ16 856 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 LRRC23Q53EV4 343 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-201ENST00000343575 FBXO48Q5FWF7 155 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 ATG16L1Q676U5 607 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 MYLK4Q86YV6 388 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-201ENST00000343575 LSMEM2Q8N112 164 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 MYO1HQ8N1T3 1032 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 OR2L2Q8NH16 312 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 SCARF2Q96GP6 870 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-201ENST00000343575 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 SIKE1Q9BRV8 207 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 CAAP1Q9H8G2 361 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 KCNK13Q9HB14 408 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 FGF22Q9HCT0 170 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 NCKIPSDQ9NZQ3 722 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 ASB1Q9Y576 335 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 ST14Q9Y5Y6 855 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 PLXND1Q9Y4D7 1925 aa14.36□□□□□ -0.11
CXCL12-201ENST00000343575 MGAT4DA6NG13 374 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 PRR19A6NJB7 356 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GPR89AB7ZAQ6 455 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GFYI3L273 518 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 FPGTO14772 594 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GRID2O43424 1007 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 SIX3O95343 332 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GPR89BP0CG08 455 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 ANPEPP15144 967 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GSTT1P30711 240 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 ACTR3P61158 418 aa14.35□□□□□ -0.11
CXCL12-201ENST00000343575 GTF2H3Q13889 308 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms