RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 SORBS2O94875 1100 aaKnown RBP22.14■■□□□ 1.13
CDX1-201ENST00000231656 SOD1P00441 154 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 OR56A5P0C7T3 313 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 CCR7P32248 378 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 PKNOX1P55347 436 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 RPS21P63220 83 aaKnown RBP22.14■■□□□ 1.13
CDX1-201ENST00000231656 MAPRE2Q15555 327 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 PHKG1Q16816 387 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 EFL1Q7Z2Z2 1120 aaKnown RBP22.14■■□□□ 1.13
CDX1-201ENST00000231656 MYLK4Q86YV6 388 aaPredicted RBP22.14■■□□□ 1.13
CDX1-201ENST00000231656 PJA1Q8NG27 643 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 DLG3Q92796 817 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 GLYATL1Q969I3 302 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 EFCAB1Q9HAE3 211 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 EBF1Q9UH73 591 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 TIMM22Q9Y584 194 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 EIF3FO00303 357 aaPredicted RBP22.13■■□□□ 1.13
CDX1-201ENST00000231656 LINC00032P0C843 101 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 CCNG1P51959 295 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 GRB7Q14451 532 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 GBX1Q14549 363 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 AGERQ15109 404 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 AGKQ53H12 422 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 KIAA1161Q6NSJ0 714 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 GOLGA7Q7Z5G4 137 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 PGAM4Q8N0Y7 254 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 PGBD3Q8N328 593 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 PREBQ9HCU5 417 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 GIMAP2Q9UG22 337 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 ST14Q9Y5Y6 855 aa22.13■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3DA0A087WVF3 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3IA0A087WXS9 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3EA0A087X179 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3KA0A087X1G2 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 A0A1W2PQU0 124 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3FA6NER0 549 aaPredicted RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3LB9A6J9 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 VPS4BO75351 444 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3HP0C7X1 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 PRR35P0CG20 571 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 GPX3P22352 226 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 AOAHP28039 575 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ACADVLP49748 655 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ERVPABLB-1P60509 514 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TMEM259Q4ZIN3 620 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 XKR7Q5GH72 579 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3GQ6DHY5 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 RAET1GQ6H3X3 334 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3CQ6IPX1 549 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ANO7Q6IWH7 933 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TBC1D3Q8IZP1 549 aaPredicted RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 EFCAB3Q8N7B9 438 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 DDHD1Q8NEL9 900 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 OR52B6Q8NGF0 335 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 CLDN23Q96B33 292 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 NPAS2Q99743 824 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 RDH14Q9HBH5 336 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ITM2CQ9NQX7 267 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 NDE1Q9NXR1 346 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 USP36Q9P275 1121 aaKnown RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 CNOT6Q9ULM6 557 aaKnown RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 NCOR1O75376 2440 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 OR7A17O14581 309 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 RNGTTO60942 597 aaKnown RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 OR4F21O95013 312 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ENO3P13929 434 aaPredicted RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 ATP1B2P14415 290 aaPredicted RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 VCLP18206 1134 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 ACSL1P33121 698 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 GPR1P46091 355 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 GTF2H2Q13888 395 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 FGL2Q14314 439 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 GTF2H2CQ6P1K8 395 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 NEK5Q6P3R8 708 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 HPS6Q86YV9 775 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TSTD1Q8NFU3 115 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 UBTD2Q8WUN7 234 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 TUBGCP3Q96CW5 907 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 HHIPQ96QV1 700 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 C1QTNF2Q9BXJ5 285 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 NOL11Q9H8H0 719 aaKnown RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 CCDC167Q9P0B6 97 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 STX18Q9P2W9 335 aaKnown RBP22.12■■□□□ 1.13
CDX1-201ENST00000231656 POMPQ9Y244 141 aa22.12■■□□□ 1.13
CDX1-201ENST00000231656 INPP4BO15327 924 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 MTX2O75431 263 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 GUCA1CO95843 209 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 PAK4O96013 591 aaPredicted RBP22.11■■□□□ 1.13
CDX1-201ENST00000231656 LBPP18428 481 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 AKT1P31749 480 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 STX5Q13190 355 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 WSCD2Q2TBF2 565 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 TMEM31Q5JXX7 168 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 LDLRAP1Q5SW96 308 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 LETMD1Q6P1Q0 360 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 DET1Q7L5Y6 550 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 HORMAD1Q86X24 394 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 PLA2G15Q8NCC3 412 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 KLK6Q92876 244 aa22.11■■□□□ 1.13
CDX1-201ENST00000231656 RHBDF1Q96CC6 855 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms