RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CYP1B1Q16678 543 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PQLC3Q8N755 202 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 TYRP1P17643 537 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 NDUFS1P28331 727 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 KIR3DL1P43629 444 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 TMEM164Q5U3C3 297 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 LMO3Q8TAP4 145 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PIGKQ92643 395 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 SORCS3Q9UPU3 1222 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PAK4O96013 591 aaPredicted RBP17.07■□□□□ 0.32
PTPN21-208ENST00000556564 ITGA2P17301 1181 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PRKCHP24723 683 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 IL12BP29460 328 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 ZFP1Q6P2D0 407 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 GRIP2Q9C0E4 1043 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 GRHL1Q9NZI5 618 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 TAC3Q9UHF0 121 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PIP5K1BO14986 540 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 CST5P28325 142 aaPredicted RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 LRRTM3Q86VH5 581 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 RALGPS2Q86X27 583 aaPredicted RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 KCT2Q8NC54 265 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 TPSD1Q9BZJ3 242 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 TRIM38O00635 465 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 KMOO15229 486 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 CLOCKO15516 846 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 RNGTTO60942 597 aaKnown RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 GNAZP19086 355 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ETV3P41162 512 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 SLC9B2Q86UD5 537 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 WDTC1Q8N5D0 677 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF248Q8NDW4 579 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 MAGEE2Q8TD90 523 aaPredicted RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 AP4S1Q9Y587 144 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 NDUFS4O43181 175 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 VARSP26640 1264 aaKnown RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 HNRNPH1P31943 449 aaKnown RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 FGD2Q7Z6J4 655 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 APCDD1Q8J025 514 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 SLC22A18Q96BI1 424 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 TUBGCP5Q96RT8 1024 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PRMT3O60678 531 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PRAMEF14Q5SWL7 426 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PRAMEF13Q5VWM6 474 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 EPB41L4BQ9H329 900 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 hCG_2014768A0A024R1R8 64 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 M0QZQ0 153 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 IL6P05231 212 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 IDH2P48735 452 aaKnown RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 RPS21P63220 83 aaKnown RBP17.06■□□□□ 0.32
PTPN21-208ENST00000556564 C1orf220Q5T0J3 134 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ABHD13Q7L211 337 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ANKRD46Q86W74 232 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 CADM2Q8N3J6 435 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PPM1MQ96MI6 270 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 VPS35Q96QK1 796 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 FIZ1Q96SL8 496 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 ANKHQ9HCJ1 492 aa17.06■□□□□ 0.32
PTPN21-208ENST00000556564 PTGES3LE9PB15 166 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 SUV39H1O43463 412 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 CST1P01037 141 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 SOX6P35712 828 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 MRPS15P82914 257 aaKnown RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 SLBPQ14493 270 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 C8orf33Q9H7E9 229 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 ABI3Q9P2A4 366 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 MYL12BO14950 172 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 ADAMTS4O75173 837 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 PGLSO95336 258 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 CYP11A1P05108 521 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 DPY19L3Q6ZPD9 716 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 BNIPLQ7Z465 357 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 AADATQ8N5Z0 425 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 FAM3CQ92520 227 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 PPM1HQ9ULR3 514 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 ERVK-11Q9UQG0 969 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 GLDCP23378 1020 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 HNF1BP35680 557 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 CREB5Q02930 508 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 RALGPS1Q5JS13 557 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 TMEM25Q86YD3 366 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 CDCA3Q99618 268 aaPredicted RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 FZD3Q9NPG1 666 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 AGXTP21549 392 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
PTPN21-208ENST00000556564 HSD17B2P37059 387 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 NFKB2Q00653 900 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 VPS26BQ4G0F5 336 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 PRRT3Q5FWE3 981 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 CLDN19Q8N6F1 224 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 UBR7Q8N806 425 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 MAFFQ9ULX9 164 aa17.05■□□□□ 0.32
PTPN21-208ENST00000556564 PCDHB11Q9Y5F2 797 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms