RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 GSDMDP57764 484 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 TUBB3Q13509 450 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 ZRANB3Q5FWF4 1079 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 ARMC6Q6NXE6 501 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 ZNF449Q6P9G9 518 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 LILRA3Q8N6C8 439 aaPredicted RBP17.29■□□□□ 0.36
HDDC3-201ENST00000330334 GALNT6Q8NCL4 622 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 ACVR1CQ8NER5 493 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 OR8K5Q8NH50 307 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 NAT14Q8WUY8 206 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 OR52A5Q9H2C5 316 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 COG4Q9H9E3 785 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 RIMKLBQ9ULI2 386 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 PCDHGA6Q9Y5G7 932 aa17.29■□□□□ 0.36
HDDC3-201ENST00000330334 OR6C74A6NCV1 312 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 CCL22O00626 93 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 SUV39H1O43463 412 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 LIASO43766 372 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 ZBTB11O95625 1053 aaPredicted RBP17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TCN2P20062 427 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 F8A1P23610 371 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 FDFT1P37268 417 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 ARL4DP49703 201 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 POLE2P56282 527 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TUBB4BP68371 445 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 CDH17Q12864 832 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 KCNAB2Q13303 367 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 KRT33BQ14525 404 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 ITIH4Q14624 930 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 POU6F1Q14863 301 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 APOBEC4Q8WW27 367 aaKnown RBP17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 TFB2MQ9H5Q4 396 aaKnown RBP17.28■□□□□ 0.36
HDDC3-201ENST00000330334 MVB12BQ9H7P6 319 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 FGF21Q9NSA1 209 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 LNPEPQ9UIQ6 1025 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 CROTQ9UKG9 612 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 BTRCQ9Y297 605 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 PCDHB3Q9Y5E6 796 aa17.28■□□□□ 0.36
HDDC3-201ENST00000330334 HEMK1Q9Y5R4 338 aaPredicted RBP17.28■□□□□ 0.36
HDDC3-201ENST00000330334 ASH1LQ9NR48 2969 aaKnown RBP17.28■□□□□ 0.36
HDDC3-201ENST00000330334 C21orf140B9A014 251 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 IFRD1O00458 451 aaPredicted RBP17.27■□□□□ 0.36
HDDC3-201ENST00000330334 SLC28A2O43868 658 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 GAS8O95995 478 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 MSL3P1P0C860 447 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 DLSTP36957 453 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 NSG1P42857 185 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 PRKAA1Q13131 559 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 DBN1Q16643 649 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 TMTC4Q5T4D3 741 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 PWWP2BQ6NUJ5 590 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 DUS1LQ6P1R4 473 aaKnown RBP17.27■□□□□ 0.36
HDDC3-201ENST00000330334 PACS1Q6VY07 963 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 ZNF662Q6ZS27 426 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 SLC13A5Q86YT5 568 aaPredicted RBP17.27■□□□□ 0.36
HDDC3-201ENST00000330334 OR4E2Q8NGC2 313 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 ELMO2Q96JJ3 720 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 ETNK1Q9HBU6 452 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 SYTL2Q9HCH5 934 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 LHX9Q9NQ69 397 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 LATS2Q9NRM7 1088 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 C1GALT1Q9NS00 363 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 FAM8A1Q9UBU6 413 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 POMT2Q9UKY4 750 aa17.27■□□□□ 0.36
HDDC3-201ENST00000330334 HEATR9A2RTY3 570 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 LIN7AO14910 233 aaPredicted RBP17.26■□□□□ 0.35
HDDC3-201ENST00000330334 ARHGAP6O43182 974 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 EBLN1P0CF75 366 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 PRKAR1AP10644 381 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
HDDC3-201ENST00000330334 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
HDDC3-201ENST00000330334 KPNA2P52292 529 aaKnown RBP17.26■□□□□ 0.35
HDDC3-201ENST00000330334 PLOD1Q02809 727 aaPredicted RBP17.26■□□□□ 0.35
HDDC3-201ENST00000330334 SEPT6Q14141 434 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 KCNAB1Q14722 419 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 LYPLAL1Q5VWZ2 237 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 ATG14Q6ZNE5 492 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 CLDN19Q8N6F1 224 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 LCN9Q8WX39 176 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 PEX13Q92968 403 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 SGSM3Q96HU1 749 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 RANBP9Q96S59 729 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 GPR87Q9BY21 358 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 SRMSQ9H3Y6 488 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 GUCA1BQ9UMX6 200 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
HDDC3-201ENST00000330334 TIAF1O95411 115 aa17.25■□□□□ 0.35
HDDC3-201ENST00000330334 POLR2CP19387 275 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-201ENST00000330334 ADRA1DP25100 572 aa17.25■□□□□ 0.35
HDDC3-201ENST00000330334 PDHA2P29803 388 aa17.25■□□□□ 0.35
HDDC3-201ENST00000330334 ACVR1Q04771 509 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms