RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TRIM25Q14258 630 aaKnown RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 VPS26BQ4G0F5 336 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 PDE12Q6L8Q7 609 aaKnown RBP17.82■□□□□ 0.44
SMPD3-211ENST00000568373 BLOC1S3Q6QNY0 202 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 CHCHD4Q8N4Q1 142 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 CD244Q9BZW8 370 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 BRINP2Q9C0B6 783 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 PCDH12Q9NPG4 1184 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 MAP10Q9P2G4 905 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 IL36AQ9UHA7 158 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
SMPD3-211ENST00000568373 PRORSD1PA6NEY8 169 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SRPRAP08240 638 aaKnown RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 CISD3P0C7P0 127 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 TIMP2P16035 220 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 DCDC1P59894 354 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 ATP6AP1LQ52LC2 224 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 COQ5Q5HYK3 327 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SAMD4BQ5PRF9 694 aaKnown RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 C6orf136Q5SQH8 315 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 METTL2BQ6P1Q9 378 aaKnown RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 Q6ZSR9 355 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 HSD11B1LQ7Z5J1 315 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 TSPEARQ8WU66 669 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 OSCP1Q8WVF1 389 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SMG7Q92540 1137 aaKnown RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 ECSITQ9BQ95 431 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 VCX3BQ9H321 246 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 FAM83DQ9H4H8 585 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 C6orf203Q9P0P8 240 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 OPTCQ9UBM4 332 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 CD300AQ9UGN4 299 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 C9JVG2 144 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 CASQ2O14958 399 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 HOXC11O43248 304 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 ASLP04424 464 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 NFKBIAP25963 317 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 AOAHP28039 575 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 HTR6P50406 440 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 RALGDSQ12967 914 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 TCEAL5Q5H9L2 206 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 IL27RAQ6UWB1 636 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 MILR1Q7Z6M3 343 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 PQLC1Q8N2U9 271 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 KIAA1958Q8N8K9 716 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 WFIKKN2Q8TEU8 576 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SCAMP4Q969E2 229 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 RSPRY1Q96DX4 576 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 GPATCH1Q9BRR8 931 aaKnown RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SLC39A3Q9BRY0 314 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 MTG2Q9H4K7 406 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 SLC52A3Q9NQ40 469 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 BATF3Q9NR55 127 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 EPS15L1Q9UBC2 864 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 MBD1Q9UIS9 605 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-211ENST00000568373 ANGPTL3Q9Y5C1 460 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 CEP290O15078 2479 aa17.81■□□□□ 0.44
SMPD3-211ENST00000568373 KATNA1O75449 491 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 ADH1CP00326 375 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 ATP1B2P14415 290 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-211ENST00000568373 AKT1P31749 480 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 GDF5P43026 501 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 SLC7A2P52569 658 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 ATXN3P54252 364 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-211ENST00000568373 RCAN2Q14206 197 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 GBX1Q14549 363 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 PDCD4Q53EL6 469 aaKnown RBP17.8■□□□□ 0.44
SMPD3-211ENST00000568373 ZNF805Q5CZA5 627 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 LPCAT4Q643R3 524 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 DET1Q7L5Y6 550 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 FNDC5Q8NAU1 212 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 HOPXQ9BPY8 73 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-211ENST00000568373 DKK3Q9UBP4 350 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 PLXNA2O75051 1894 aa17.8■□□□□ 0.44
SMPD3-211ENST00000568373 VGLL3A8MV65 326 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 K7EPI3 171 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SYNCRIPO60506 623 aaKnown RBP17.79■□□□□ 0.44
SMPD3-211ENST00000568373 CA3P07451 260 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 PEX2P28328 305 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 TRIP10Q15642 601 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 CDKL4Q5MAI5 379 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 ANO7Q6IWH7 933 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 PRMT9Q6P2P2 845 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 Q6ZVL8 140 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 ADGRD2Q7Z7M1 963 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 C12orf40Q86WS4 652 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SFRP1Q8N474 314 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SPDL1Q96EA4 605 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 DCUN1D1Q96GG9 259 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 TEX37Q96LM6 180 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 C1orf50Q9BV19 199 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 KLHL4Q9C0H6 718 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 A0A1W2PP18 115 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 GRXCR1A8MXD5 290 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 NUAK1O60285 661 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 HMOX2P30519 316 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 ETV3P41162 512 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 VIPR2P41587 438 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 HSPA14Q0VDF9 509 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms