RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SLC5A10A0PJK1 596 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 TK2O00142 265 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 TOR1BO14657 336 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 FPGTO14772 594 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 KPNA5O15131 536 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 FSBPO95073 299 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 ENO3P13929 434 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 TFEBP19484 476 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 PI4KAP42356 2102 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 GLRBP48167 497 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 KCNC1P48547 511 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 RGS4P49798 205 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 CLDN2P57739 230 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 GNGT1P63211 74 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 IRX4P78413 519 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 CBX1P83916 185 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 PDK4Q16654 411 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 TTC19Q6DKK2 380 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 KLC3Q6P597 504 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 ZYG11AQ6WRX3 759 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 RGS9BPQ6ZS82 235 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 ABI3BPQ7Z7G0 1075 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 RASGRP3Q8IV61 690 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 OXR1Q8N573 874 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 CADM4Q8NFZ8 388 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 BIRC7Q96CA5 298 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 SCYL1Q96KG9 808 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 MAGEB18Q96M61 343 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 ATOH8Q96SQ7 321 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 MYOCQ99972 504 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 PAIP2Q9BPZ3 127 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 SIRPGQ9P1W8 387 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 COPG2Q9UBF2 871 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 GULP1Q9UBP9 304 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 MID2Q9UJV3 735 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 CDYLQ9Y232 598 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 SLC17A4Q9Y2C5 497 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 CA5BQ9Y2D0 317 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 PCYT1BQ9Y5K3 369 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 DNMT3AQ9Y6K1 912 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 TDRD6O60522 2096 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 FANCMQ8IYD8 2048 aa14.49□□□□□ -0.09
SHKBP1-211ENST00000595945 C17orf113A0A1B0GUU1 675 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 A0A1W2PPC4 97 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 TMEM202A6NGA9 273 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 SRRM3A6NNA2 597 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 METTL12A8MUP2 240 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 PRAMEF26H0Y7S4 382 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 CACNB4O00305 520 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 CDC7O00311 574 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 SLCO2B1O94956 709 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 CEACAM5P06731 702 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 MPC1LP0DKB6 136 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 CPA3P15088 417 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 ALDH3A1P30838 453 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 YPEL5P62699 121 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 DMWDQ09019 674 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 NFATC4Q14934 902 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 OR4D1Q15615 310 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 TPRG1LQ5T0D9 272 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 DOK6Q6PKX4 331 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 NAPRTQ6XQN6 538 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 NEK10Q6ZWH5 1172 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 PIWIL4Q7Z3Z4 852 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 OR6Y1Q8NGX8 325 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 ELMO1Q92556 727 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 GLMNQ92990 594 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 ALG9Q9H6U8 611 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 RMI1Q9H9A7 625 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 GPR27Q9NS67 375 aa14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 SPATA6Q9NWH7 488 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-211ENST00000595945 NPEPPSL1A6NEC2 478 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 H0Y8X5 98 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 DLX3O60479 287 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 KERAO60938 352 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 NDUFS2O75306 463 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 FUCA1P04066 466 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 FGF3P11487 239 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 TAC1P20366 129 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 LSP1P33241 339 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 TSNQ15631 228 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 USP39Q53GS9 565 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 CRTC3Q6UUV7 619 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 SLC36A4Q6YBV0 504 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 LRRTM4Q86VH4 590 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 TRAPPC5Q8IUR0 188 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 VRK3Q8IV63 474 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 NUDCD3Q8IVD9 361 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 C10orf107Q8IVU9 208 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 MYO1HQ8N1T3 1032 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 CCDC63Q8NA47 563 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 OR2L2Q8NH16 312 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 RAB3IL1Q8TBN0 382 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 HM13Q8TCT9 377 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 DYDC1Q8WWB3 177 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 ASZ1Q8WWH4 475 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 ZNF75CPQ92670 426 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 MECRQ9BV79 373 aa14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 OXSMQ9NWU1 459 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms