RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PFKFB3Q16875 520 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 CDO1Q16878 200 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 LY6KQ17RY6 165 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 PREPLQ4J6C6 727 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 LBHQ53QV2 105 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 FNDC7Q5VTL7 733 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 MIS18BP1Q6P0N0 1132 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 RANBP10Q6VN20 620 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 ZBTB49Q6ZSB9 765 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF575Q86XF7 245 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 GSPT2Q8IYD1 628 aaKnown RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 HACE1Q8IYU2 909 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.9□□□□□ -1.623e-6■■□□□ 12.2
GABPB1-204ENST00000396464 RASGEF1AQ8N9B8 481 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM185AQ8NFB2 350 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 SYN2Q92777 582 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 PEX13Q92968 403 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 LPPQ93052 612 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 AZIN2Q96A70 460 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 AP2M1Q96CW1 435 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 SLC7A6OSQ96CW6 309 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 TPD52L3Q96J77 140 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 LRRC3BQ96PB8 259 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 PLIN2Q99541 437 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 CCT7Q99832 543 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 ELOVL1Q9BW60 279 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 NUF2Q9BZD4 464 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 SLC2A4RGQ9NR83 387 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 PANK4Q9NVE7 773 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 NKX1-2Q9UD57 310 aaPredicted RBP4.9□□□□□ -1.62
GABPB1-204ENST00000396464 POLLQ9UGP5 575 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 SLC24A2Q9UI40 661 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 HACL1Q9UJ83 578 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 SERTAD3Q9UJW9 196 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 MAB21L2Q9Y586 359 aa4.9□□□□□ -1.62
GABPB1-204ENST00000396464 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 GSAPA4D1B5 854 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF716A6NP11 495 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 B5MCH6 92 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 H0Y8G0 127 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 TRIM77I1YAP6 450 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 DNALI1O14645 258 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CETN3O15182 167 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 PPM1DO15297 605 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 LANCL1O43813 399 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 HSF2BPO75031 334 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 TOM1L1O75674 476 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CIB2O75838 187 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 GLCEO94923 617 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CH25HO95992 272 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 TFP02787 698 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 HOXB5P09067 269 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SPATA31D3P0C874 917 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF735P0CB33 412 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 NEFHP12036 1026 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CCDC130P13994 396 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 PKMP14618 531 aaKnown RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF182P17025 639 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 LBPP18428 481 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ITGALP20701 1170 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 DRD4P21917 467 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CYP2F1P24903 491 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CCT6AP40227 531 aaKnown RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SMSP52788 366 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 EIF3EP60228 445 aaKnown RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ACTR3P61158 418 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SHC2P98077 582 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 MC2RQ01718 297 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 HGFACQ04756 655 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 DRAP1Q14919 205 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 RCN1Q15293 331 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 GPR162Q16538 588 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ST3GAL2Q16842 350 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 EDRF1Q3B7T1 1238 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SOWAHCQ53LP3 525 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 GCNT6Q5T4J0 391 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 TXNRD3NBQ6F5E7 133 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 IL20RBQ6UXL0 311 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SPATA31D4Q6ZUB0 917 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CENPQQ7L2Z9 268 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 PIGWQ7Z7B1 504 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 LDB1Q86U70 411 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-204ENST00000396464 DENND6AQ8IWF6 608 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 FBXO39Q8N4B4 442 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 AADATQ8N5Z0 425 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CAGE1Q8TC20 777 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 OSCP1Q8WVF1 389 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 ATP6V1G3Q96LB4 118 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 C1QTNF5Q9BXJ0 243 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CAPS2Q9BXY5 557 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 TRIM2Q9C040 744 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 LRRCC1Q9C099 1032 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 CDCP1Q9H5V8 836 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 SAP30LQ9HAJ7 183 aa4.89□□□□□ -1.63
GABPB1-204ENST00000396464 EPB41L5Q9HCM4 733 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms