RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 LINGO3P0C6S8 592 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 RPS9P46781 194 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SH3BP2P78314 561 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 MS4A2Q01362 244 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 RHDQ02161 417 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 CHIT1Q13231 466 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 TLDC1Q6P9B6 456 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 KDELC1Q6UW63 502 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SERPINA13PQ6UXR4 307 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 CHST9Q7L1S5 443 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 PROSER1Q86XN7 944 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 RAVER1Q8IY67 606 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 OR9Q1Q8NGQ5 310 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 RTP3Q9BQQ7 232 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 DERL2Q9GZP9 239 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 NLE1Q9NVX2 485 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 VPS51Q9UID3 782 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SPO11Q9Y5K1 396 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 G3V2T6 193 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 CLIC3O95833 236 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 FTH1P02794 183 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 G6PDP11413 515 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 NR4A1P22736 598 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 NEK2P51955 445 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 CNTN1Q12860 1018 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 CSTF3Q12996 717 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 PLA2G4EQ3MJ16 856 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SNX20Q7Z614 316 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SFRP1Q8N474 314 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 OR10Q1Q8NGQ4 319 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ASZ1Q8WWH4 475 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SLC13A3Q8WWT9 602 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 RORBQ92753 470 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 PTERQ96BW5 349 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ITCHQ96J02 903 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 MTERF1Q99551 399 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 IGFLR1Q9H665 355 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ARMC7Q9H6L4 198 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 DNAJC11Q9NVH1 559 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SMPD3Q9NY59 655 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ELOVL7A1L3X0 281 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 HHLA1C9JL84 531 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 STC2O76061 302 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 KIR3DL1P43629 444 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 XKR4Q5GH76 650 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 KCTD11Q693B1 232 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 TMPRSS11BQ86T26 416 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ZC3H7AQ8IWR0 971 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 NELL1Q92832 810 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 C11orf84Q9BUA3 381 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 ADPRHL2Q9NX46 363 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SUCOQ9UBS9 1254 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 C3orf18Q9UK00 162 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SAMHD1Q9Y3Z3 626 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 DNAJC15Q9Y5T4 150 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 KCNE2Q9Y6J6 123 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 SCN1AP35498 2009 aa8.34□□□□□ -1.07
PTPRK-206ENST00000368215 POLR2AP24928 1970 aaKnown RBP8.34□□□□□ -1.07
PTPRK-206ENST00000368215 GPR39O43194 453 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 HPCAL1P37235 193 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 YAP1P46937 504 aaKnown RBP8.33□□□□□ -1.08
PTPRK-206ENST00000368215 RFX3P48380 749 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 RING1Q06587 406 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 NADK2Q4G0N4 442 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 SULT1C3Q6IMI6 304 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 Q6ZVU0 165 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 MAVSQ7Z434 540 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 BNIPLQ7Z465 357 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
PTPRK-206ENST00000368215 KBTBD2Q8IY47 623 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 KLHDC9Q8NEP7 349 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 SUSD6Q92537 303 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 MYOCQ99972 504 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 NRXN2Q9P2S2 1712 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 FAM234BA2RU67 622 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 NOBOXO60393 691 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 OR6B1O95007 311 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 GPIP06744 558 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 DNAJB1P25685 340 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 NSG1P42857 185 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 SEMA3BQ13214 749 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 KCTD21Q4G0X4 260 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 FGD3Q5JSP0 725 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 TAS1R1Q7RTX1 841 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 GOLGA7Q7Z5G4 137 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 B4GALNT2Q8NHY0 566 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 REXO5Q96IC2 774 aaKnown RBP8.33□□□□□ -1.08
PTPRK-206ENST00000368215 SLC45A3Q96JT2 553 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 SGK2Q9HBY8 427 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 TMCC3Q9ULS5 477 aa8.33□□□□□ -1.08
PTPRK-206ENST00000368215 CLCA2Q9UQC9 943 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms