RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 APOBEC4Q8WW27 367 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 STARD8Q92502 1023 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 SPATA13Q96N96 652 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 PLEKHG4BQ96PX9 1271 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 C10orf88Q9H8K7 445 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 TRIM39Q9HCM9 518 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 PRDM8Q9NQV8 689 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 UBP1Q9NZI7 540 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 NFKBIL1Q9UBC1 381 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 KLHL3Q9UH77 587 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 LOC285095A0A1B0GVY8 99 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 CHUKO15111 745 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 TOX3O15405 576 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 STIP1P31948 543 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 FOXK1P85037 733 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF569Q5MCW4 686 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 PDPK2PQ6A1A2 396 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 KDELC1Q6UW63 502 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC35B2Q8TB61 432 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 C9orf72Q96LT7 481 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 ZSCAN5AQ9BUG6 496 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 FSD1LQ9BXM9 530 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 GPR63Q9BZJ6 419 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 OR2AG1Q9H205 316 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 OGFRQ9NZT2 677 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 JRKLQ9Y4A0 524 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 HECTD1Q9ULT8 2610 aa17.26■□□□□ 0.35
SHKBP1-203ENST00000594298 KIF5CO60282 957 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC25A14O95258 325 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 HLA-DPA1P20036 260 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TCN2P20062 427 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 FAM182AQ5T1J6 154 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 ARHGEF18Q6ZSZ5 1173 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TMEM26Q6ZUK4 368 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TMC3Q7Z5M5 1100 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 ADGRG6Q86SQ4 1221 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TRAM1L1Q8N609 369 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 IPMKQ8NFU5 416 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 ABHD17AQ96GS6 310 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 OXNAD1Q96HP4 312 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TLR10Q9BXR5 811 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 KCNF1Q9H3M0 494 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TRABDQ9H4I3 376 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF768Q9H5H4 540 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 HACD3Q9P035 362 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 SCHIP1Q9P0W5 487 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 RPS6KL1Q9Y6S9 549 aa17.25■□□□□ 0.35
SHKBP1-203ENST00000594298 TCRBV7S2A1N4TA0A589 114 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 PRR19A6NJB7 356 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 UBXN7O94888 489 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 GFERP55789 205 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 SEPT6Q14141 434 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 IL11RAQ14626 422 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 PARP6Q2NL67 630 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 DEFB109BQ30KR1 87 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 FAM71DQ8N9W8 422 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 CCDC110Q8TBZ0 833 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 GLYATL1Q969I3 302 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 MRGPRX2Q96LB1 330 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 TIMM29Q9BSF4 260 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 ULBP3Q9BZM4 244 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 OSGEPL1Q9H4B0 414 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF71Q9NQZ8 489 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 HOMER3Q9NSC5 361 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 POT1Q9NUX5 634 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF624Q9P2J8 865 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC23A2Q9UGH3 650 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF148Q9UQR1 794 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 R3HDM2Q9Y2K5 976 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 KCTD3Q9Y597 815 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC30A1Q9Y6M5 507 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 MAST4O15021 2626 aa17.24■□□□□ 0.35
SHKBP1-203ENST00000594298 F5H423 210 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 KMOO15229 486 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 PSMD3O43242 534 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 LIASO43766 372 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 CEP104O60308 925 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 VIPP01282 170 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 F8A1P23610 371 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC19A1P41440 591 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 FOXM1Q08050 763 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 UBAP2LQ14157 1087 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC1A5Q15758 541 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 P3H1Q32P28 736 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF648Q5T619 568 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ALS2CLQ60I27 953 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 CRTC3Q6UUV7 619 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ABRAXAS1Q6UWZ7 409 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 WASH2PQ6VEQ5 465 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC25A41Q8N5S1 370 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 PBKQ96KB5 322 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 TMEM121Q9BTD3 319 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms