RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ZFP36L1Q07352 338 aaKnown RBP16.13■□□□□ 0.17
DNMT1-229ENST00000593049 KCNJ11Q14654 390 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 AMZ1Q400G9 498 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 METRNLQ641Q3 311 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 ZNF449Q6P9G9 518 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 PACS1Q6VY07 963 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 DET1Q7L5Y6 550 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 PROSER1Q86XN7 944 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 OR13J1Q8NGT2 312 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 MDM1Q8TC05 714 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 HDAC10Q969S8 669 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 CXorf40BQ96DE9 158 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 ATXN7L3BQ96GX2 97 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 FAM96AQ9H5X1 160 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 MRM3Q9HC36 420 aaKnown RBP16.13■□□□□ 0.17
DNMT1-229ENST00000593049 SMARCAL1Q9NZC9 954 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 AKAP7Q9P0M2 348 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-229ENST00000593049 ZMIZ1Q9ULJ6 1067 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 PCDHGA8Q9Y5G5 932 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 FRYQ5TBA9 3013 aa16.13■□□□□ 0.17
DNMT1-229ENST00000593049 CCDC78A2IDD5 438 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 CCDC162PA2VCL2 907 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 LILRA5A6NI73 299 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 RPL10P27635 214 aaKnown RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 PBLDP30039 288 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 FOXN2P32314 431 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 NSG1P42857 185 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 ARSDP51689 593 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 PDX1P52945 283 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 UBE2IP63279 158 aaKnown RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 GABREP78334 506 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 TRA2AQ13595 282 aaKnown RBP eCLIP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 PPP1R7Q15435 360 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 SEPT7Q16181 437 aaKnown RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 DBN1Q16643 649 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 AARS2Q5JTZ9 985 aaKnown RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 IGF2-ASQ6U949 168 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 MCUQ8NE86 351 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 OR6P1Q8NGX9 317 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 OR4L1Q8NH43 312 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 HM13Q8TCT9 377 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 SLCO2A1Q92959 643 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 CCM2Q9BSQ5 444 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 PCYOX1Q9UHG3 505 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 ANAPC5Q9UJX4 755 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 ATXN7L1Q9ULK2 861 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-229ENST00000593049 NEU2Q9Y3R4 380 aa16.12■□□□□ 0.17
DNMT1-229ENST00000593049 MAP1BP46821 2468 aaKnown RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 BRINP1O60477 761 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 GOT2P00505 430 aaKnown RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 BRAFP15056 766 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 RBMS1P29558 406 aaKnown RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SLC19A1P41440 591 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 PPM1FP49593 454 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 CDKN1CP49918 316 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 NFE2L1Q14494 772 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 FASTKD1Q53R41 847 aaKnown RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 C3orf38Q5JPI3 329 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 WDR74Q6RFH5 385 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 TMEM26Q6ZUK4 368 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SYDE1Q6ZW31 735 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SLITRK4Q8IW52 837 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 PIANPQ8IYJ0 282 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 OR4D9Q8NGE8 314 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 ZNF578Q96N58 590 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 CMKLR1Q99788 373 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 KIFC1Q9BW19 673 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 FOXP3Q9BZS1 431 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 ZMYND15Q9H091 742 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 XAB2Q9HCS7 855 aaKnown RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 CHRAC1Q9NRG0 131 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SCHIP1Q9P0W5 487 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 ZNF624Q9P2J8 865 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SLC2A6Q9UGQ3 507 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
DNMT1-229ENST00000593049 MAGEB16A2A368 324 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 CCDC188H7C350 402 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 PLD2O14939 933 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 HGSO14964 777 aaPredicted RBP16.1■□□□□ 0.17
DNMT1-229ENST00000593049 CASC3O15234 703 aaKnown RBP16.1■□□□□ 0.17
DNMT1-229ENST00000593049 SGTAO43765 313 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 FTH1P02794 183 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 MPOP05164 745 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 SLC35G4P0C7Q5 338 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 MGAT1P26572 445 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 LIMK2P53671 638 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 DRG2P55039 364 aaKnown RBP16.1■□□□□ 0.17
DNMT1-229ENST00000593049 ERVPABLB-1P60509 514 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 RPA4Q13156 261 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 PHF19Q5T6S3 580 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 TMEM71Q6P5X7 295 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 USP53Q70EK8 1073 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 ZNF534Q76KX8 674 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 RAB11FIP2Q7L804 512 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 B3GNT8Q7Z7M8 397 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 PCGF5Q86SE9 256 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 CREG2Q8IUH2 290 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 MPP5Q8N3R9 675 aa16.1■□□□□ 0.17
DNMT1-229ENST00000593049 FBXO39Q8N4B4 442 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms